Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 FO393414.2-201ENST00000405153 598 ntBASIC16.6■□□□□ 0.25
ATP2A3Q93084 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 MEIS3P1-201ENST00000495167 958 ntBASIC16.6■□□□□ 0.25
ATP2A3Q93084 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 AL359881.2-201ENST00000602973 570 ntBASIC16.6■□□□□ 0.25
ATP2A3Q93084 CHCHD2P3-201ENST00000603038 451 ntBASIC16.6■□□□□ 0.25
ATP2A3Q93084 AC099568.2-201ENST00000609194 695 ntBASIC16.6■□□□□ 0.25
ATP2A3Q93084 AC074044.1-201ENST00000609673 707 ntBASIC16.6■□□□□ 0.25
ATP2A3Q93084 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATP2A3Q93084 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.6■□□□□ 0.25
ATP2A3Q93084 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 AL512384.1-201ENST00000406683 331 ntBASIC16.59■□□□□ 0.25
ATP2A3Q93084 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 GPR53P-205ENST00000457298 1084 ntBASIC16.59■□□□□ 0.25
ATP2A3Q93084 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 GIMAP3P-201ENST00000495150 836 ntBASIC16.59■□□□□ 0.25
ATP2A3Q93084 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 AL008721.1-201ENST00000609964 604 ntBASIC16.59■□□□□ 0.25
ATP2A3Q93084 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 CYP4F24P-201ENST00000586049 1580 ntBASIC16.59■□□□□ 0.25
ATP2A3Q93084 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.59■□□□□ 0.25
ATP2A3Q93084 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ATP2A3Q93084 AL161772.1-201ENST00000610494 4412 ntBASIC16.59■□□□□ 0.25
ATP2A3Q93084 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2A3Q93084 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
ATP2A3Q93084 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
ATP2A3Q93084 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
ATP2A3Q93084 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
ATP2A3Q93084 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A3Q93084 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A3Q93084 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 INE1-201ENST00000456273 945 ntBASIC16.58■□□□□ 0.24
ATP2A3Q93084 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A3Q93084 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ATP2A3Q93084 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.58■□□□□ 0.24
ATP2A3Q93084 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms