Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 AC006001.1-201ENST00000325130 474 ntBASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 AC015910.1-201ENST00000579400 975 ntBASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 AP005019.2-201ENST00000615104 511 ntBASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
SYNPOQ8N3V7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
SYNPOQ8N3V7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
SYNPOQ8N3V7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AC022188.1-201ENST00000620960 1664 ntBASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AL133267.1-201ENST00000398220 340 ntBASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 KRT18P25-201ENST00000508931 1278 ntBASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AP001258.2-201ENST00000529891 490 ntBASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AC097359.3-201ENST00000603982 1210 ntBASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AL022328.3-201ENST00000607943 679 ntBASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AC132938.4-201ENST00000623835 848 ntBASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 AL162727.3-201ENST00000635661 2787 ntBASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SYNPOQ8N3V7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 ME2P1-201ENST00000426028 1970 ntBASIC15.88■□□□□ 0.13
SYNPOQ8N3V7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 553.3 ms