Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 RPL7P35-201ENST00000446943 740 ntBASIC15.06■□□□□ 0
RSPO4Q2I0M5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 AC116345.2-201ENST00000512837 523 ntBASIC15.06■□□□□ 0
RSPO4Q2I0M5 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 AL023803.2-201ENST00000620080 638 ntBASIC15.06■□□□□ 0
RSPO4Q2I0M5 BX539320.1-201ENST00000623759 877 ntBASIC15.06■□□□□ 0
RSPO4Q2I0M5 AC127024.7-201ENST00000625101 200 ntBASIC15.06■□□□□ 0
RSPO4Q2I0M5 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 AC084018.2-201ENST00000613093 2607 ntBASIC15.06■□□□□ 0
RSPO4Q2I0M5 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 AL157791.1-201ENST00000553667 1699 ntBASIC15.06■□□□□ 0
RSPO4Q2I0M5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RSPO4Q2I0M5 GGT4P-201ENST00000623672 1708 ntBASIC15.06■□□□□ 0
RSPO4Q2I0M5 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.06■□□□□ 0
RSPO4Q2I0M5 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.05■□□□□ 0
RSPO4Q2I0M5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
RSPO4Q2I0M5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RSPO4Q2I0M5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RSPO4Q2I0M5 AC092068.3-201ENST00000587894 2016 ntBASIC15.05■□□□□ 0
RSPO4Q2I0M5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
RSPO4Q2I0M5 UBALD1-205ENST00000590891 2641 ntBASIC15.05■□□□□ 0
RSPO4Q2I0M5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
RSPO4Q2I0M5 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.05■□□□□ 0
RSPO4Q2I0M5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 FAM8A4P-201ENST00000435433 1213 ntBASIC15.05■□□□□ -0
RSPO4Q2I0M5 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 AC079112.1-201ENST00000454972 939 ntBASIC15.05■□□□□ -0
RSPO4Q2I0M5 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 AC103988.2-201ENST00000561804 725 ntBASIC15.05■□□□□ -0
RSPO4Q2I0M5 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 AC022748.3-201ENST00000621828 275 ntBASIC15.05■□□□□ -0
RSPO4Q2I0M5 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 KRT8P29-201ENST00000420409 1371 ntBASIC15.05■□□□□ -0
RSPO4Q2I0M5 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.05■□□□□ -0
RSPO4Q2I0M5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
RSPO4Q2I0M5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RSPO4Q2I0M5 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms