Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK5Q00535 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.18□□□□□ -0.14
CDK5Q00535 AZGP1P1-201ENST00000411909 902 ntBASIC14.18□□□□□ -0.14
CDK5Q00535 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.18□□□□□ -0.14
CDK5Q00535 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
CDK5Q00535 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.18□□□□□ -0.14
CDK5Q00535 FAM86C2P-203ENST00000528684 1004 ntBASIC14.18□□□□□ -0.14
CDK5Q00535 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CDK5Q00535 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.18□□□□□ -0.14
CDK5Q00535 AP000842.3-202ENST00000569238 1080 ntBASIC14.18□□□□□ -0.14
CDK5Q00535 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.18□□□□□ -0.14
CDK5Q00535 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.18□□□□□ -0.14
CDK5Q00535 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.18□□□□□ -0.14
CDK5Q00535 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CDK5Q00535 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
CDK5Q00535 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK5Q00535 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK5Q00535 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK5Q00535 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK5Q00535 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.18□□□□□ -0.14
CDK5Q00535 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.18□□□□□ -0.14
CDK5Q00535 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.18□□□□□ -0.14
CDK5Q00535 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDK5Q00535 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
CDK5Q00535 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDK5Q00535 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDK5Q00535 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
CDK5Q00535 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CDK5Q00535 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK5Q00535 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK5Q00535 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.17□□□□□ -0.14
CDK5Q00535 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK5Q00535 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 AC243562.1-201ENST00000560672 389 ntBASIC14.17□□□□□ -0.14
CDK5Q00535 LINC01225-203ENST00000563550 1244 ntBASIC14.17□□□□□ -0.14
CDK5Q00535 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.17□□□□□ -0.14
CDK5Q00535 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK5Q00535 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK5Q00535 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.17□□□□□ -0.14
CDK5Q00535 AC092865.6-201ENST00000642101 219 ntBASIC14.17□□□□□ -0.14
CDK5Q00535 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK5Q00535 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.17□□□□□ -0.14
CDK5Q00535 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
CDK5Q00535 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 CICP11-201ENST00000434745 2827 ntBASIC14.17□□□□□ -0.14
CDK5Q00535 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDK5Q00535 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDK5Q00535 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CDK5Q00535 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 REXO1L2P-201ENST00000425429 2069 ntBASIC14.16□□□□□ -0.14
CDK5Q00535 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.16□□□□□ -0.14
CDK5Q00535 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.16□□□□□ -0.14
CDK5Q00535 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.16□□□□□ -0.14
CDK5Q00535 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDK5Q00535 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CDK5Q00535 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CDK5Q00535 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms