Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC6P09630 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC6P09630 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC6P09630 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC6P09630 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
HOXC6P09630 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC6P09630 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC6P09630 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
HOXC6P09630 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HOXC6P09630 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HOXC6P09630 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC6P09630 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
HOXC6P09630 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HOXC6P09630 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 PCDHB19P-201ENST00000570871 2371 ntBASIC17.56■□□□□ 0.4
HOXC6P09630 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC6P09630 HSPB1P2-201ENST00000448722 546 ntBASIC17.56■□□□□ 0.4
HOXC6P09630 AC005077.2-201ENST00000449786 690 ntBASIC17.56■□□□□ 0.4
HOXC6P09630 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXC6P09630 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC6P09630 FOS-206ENST00000555347 1280 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC6P09630 ECM1P1-201ENST00000604092 1279 ntBASIC17.56■□□□□ 0.4
HOXC6P09630 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.56■□□□□ 0.4
HOXC6P09630 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXC6P09630 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC6P09630 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC6P09630 MTHFR-217ENST00000641820 1569 ntBASIC17.56■□□□□ 0.4
HOXC6P09630 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC6P09630 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HOXC6P09630 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXC6P09630 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC6P09630 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.55■□□□□ 0.4
HOXC6P09630 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.55■□□□□ 0.4
HOXC6P09630 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC6P09630 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.55■□□□□ 0.4
HOXC6P09630 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC6P09630 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.55■□□□□ 0.4
HOXC6P09630 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC6P09630 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC6P09630 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC6P09630 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.55■□□□□ 0.4
HOXC6P09630 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.55■□□□□ 0.4
HOXC6P09630 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.55■□□□□ 0.4
HOXC6P09630 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC6P09630 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 MIR3619-201ENST00000579667 83 ntBASIC17.55■□□□□ 0.4
HOXC6P09630 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC6P09630 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXC6P09630 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HOXC6P09630 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC6P09630 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HOXC6P09630 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXC6P09630 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HOXC6P09630 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HOXC6P09630 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXC6P09630 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms