Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 AC016700.1-201ENST00000429424 312 ntBASIC19.73■□□□□ 0.75
SCN11AQ9UI33 BX284668.4-201ENST00000453917 508 ntBASIC19.73■□□□□ 0.75
SCN11AQ9UI33 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 AC022616.1-201ENST00000518688 554 ntBASIC19.73■□□□□ 0.75
SCN11AQ9UI33 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 MIR4683-201ENST00000579659 81 ntBASIC19.73■□□□□ 0.75
SCN11AQ9UI33 NKG7-204ENST00000595217 816 ntTSL 2 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 AC244157.2-201ENST00000616239 1006 ntBASIC19.73■□□□□ 0.75
SCN11AQ9UI33 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 AP000593.2-201ENST00000542775 1433 ntBASIC19.73■□□□□ 0.75
SCN11AQ9UI33 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.73■□□□□ 0.75
SCN11AQ9UI33 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 AC084346.2-201ENST00000607097 949 ntBASIC19.72■□□□□ 0.75
SCN11AQ9UI33 AC022748.3-201ENST00000621828 275 ntBASIC19.72■□□□□ 0.75
SCN11AQ9UI33 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 RNA5SP423-201ENST00000517127 109 ntBASIC19.72■□□□□ 0.75
SCN11AQ9UI33 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 AC090616.6-203ENST00000579186 1945 ntBASIC19.72■□□□□ 0.75
SCN11AQ9UI33 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SCN11AQ9UI33 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 KRT8P4-201ENST00000509735 1454 ntBASIC19.71■□□□□ 0.75
SCN11AQ9UI33 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 AL391005.1-201ENST00000623953 2435 ntBASIC19.71■□□□□ 0.75
SCN11AQ9UI33 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 AC126915.1-201ENST00000522847 1038 ntBASIC19.71■□□□□ 0.75
SCN11AQ9UI33 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC19.71■□□□□ 0.75
SCN11AQ9UI33 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN11AQ9UI33 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCN11AQ9UI33 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SCN11AQ9UI33 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCN11AQ9UI33 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.7■□□□□ 0.74
SCN11AQ9UI33 RN7SL574P-201ENST00000581512 297 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms