Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CDCA3Q99618 AL645939.5-201ENST00000606834 243 ntBASIC16.12■□□□□ 0.17
CDCA3Q99618 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.12■□□□□ 0.17
CDCA3Q99618 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDCA3Q99618 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDCA3Q99618 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDCA3Q99618 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDCA3Q99618 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.12■□□□□ 0.17
CDCA3Q99618 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDCA3Q99618 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CDCA3Q99618 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CDCA3Q99618 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDCA3Q99618 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDCA3Q99618 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.11■□□□□ 0.17
CDCA3Q99618 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDCA3Q99618 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 KRT8P4-201ENST00000509735 1454 ntBASIC16.11■□□□□ 0.17
CDCA3Q99618 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDCA3Q99618 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDCA3Q99618 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.11■□□□□ 0.17
CDCA3Q99618 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDCA3Q99618 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 MIR33B-201ENST00000385104 96 ntBASIC16.11■□□□□ 0.17
CDCA3Q99618 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.11■□□□□ 0.17
CDCA3Q99618 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.11■□□□□ 0.17
CDCA3Q99618 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.11■□□□□ 0.17
CDCA3Q99618 EIF3FP3-201ENST00000434851 1086 ntBASIC16.11■□□□□ 0.17
CDCA3Q99618 HIST2H2BB-201ENST00000449108 381 ntBASIC16.11■□□□□ 0.17
CDCA3Q99618 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.11■□□□□ 0.17
CDCA3Q99618 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 AC134698.3-201ENST00000523880 214 ntBASIC16.11■□□□□ 0.17
CDCA3Q99618 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.11■□□□□ 0.17
CDCA3Q99618 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.11■□□□□ 0.17
CDCA3Q99618 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.11■□□□□ 0.17
CDCA3Q99618 AC106820.3-201ENST00000561653 397 ntBASIC16.11■□□□□ 0.17
CDCA3Q99618 FGFR3P5-201ENST00000564496 886 ntBASIC16.11■□□□□ 0.17
CDCA3Q99618 AC005730.2-201ENST00000564549 1184 ntBASIC16.11■□□□□ 0.17
CDCA3Q99618 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.11■□□□□ 0.17
CDCA3Q99618 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CDCA3Q99618 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CDCA3Q99618 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDCA3Q99618 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.1■□□□□ 0.17
CDCA3Q99618 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDCA3Q99618 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDCA3Q99618 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
CDCA3Q99618 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDCA3Q99618 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.1■□□□□ 0.17
CDCA3Q99618 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.1■□□□□ 0.17
CDCA3Q99618 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CDCA3Q99618 DPM3-202ENST00000368399 517 ntBASIC16.1■□□□□ 0.17
CDCA3Q99618 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDCA3Q99618 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDCA3Q99618 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.1■□□□□ 0.17
CDCA3Q99618 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.1■□□□□ 0.17
CDCA3Q99618 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.1■□□□□ 0.17
CDCA3Q99618 AL391280.1-201ENST00000506969 1062 ntBASIC16.1■□□□□ 0.17
CDCA3Q99618 AC024681.1-201ENST00000521917 487 ntBASIC16.1■□□□□ 0.17
CDCA3Q99618 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.1■□□□□ 0.17
CDCA3Q99618 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.1■□□□□ 0.17
CDCA3Q99618 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CDCA3Q99618 AL161670.2-201ENST00000557650 1227 ntBASIC16.1■□□□□ 0.17
CDCA3Q99618 AC013355.1-201ENST00000562625 723 ntBASIC16.1■□□□□ 0.17
CDCA3Q99618 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
CDCA3Q99618 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.1■□□□□ 0.17
CDCA3Q99618 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.1■□□□□ 0.17
CDCA3Q99618 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.1■□□□□ 0.17
CDCA3Q99618 AC022748.3-201ENST00000621828 275 ntBASIC16.1■□□□□ 0.17
CDCA3Q99618 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC16.1■□□□□ 0.17
CDCA3Q99618 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDCA3Q99618 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms