Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CD48P09326 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.29■□□□□ 0.2
CD48P09326 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.29■□□□□ 0.2
CD48P09326 AL645939.2-201ENST00000427340 991 ntBASIC16.29■□□□□ 0.2
CD48P09326 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.29■□□□□ 0.2
CD48P09326 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.29■□□□□ 0.2
CD48P09326 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.29■□□□□ 0.2
CD48P09326 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.29■□□□□ 0.2
CD48P09326 AC010336.2-201ENST00000564226 506 ntBASIC16.29■□□□□ 0.2
CD48P09326 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.29■□□□□ 0.2
CD48P09326 AC015911.4-201ENST00000588022 1070 ntBASIC16.29■□□□□ 0.2
CD48P09326 LINC01115-203ENST00000606068 577 ntBASIC16.29■□□□□ 0.2
CD48P09326 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.29■□□□□ 0.2
CD48P09326 MIR6069-201ENST00000620069 79 ntBASIC16.29■□□□□ 0.2
CD48P09326 AC073592.8-201ENST00000624126 511 ntBASIC16.29■□□□□ 0.2
CD48P09326 AF228730.6-201ENST00000641497 218 ntBASIC16.29■□□□□ 0.2
CD48P09326 AC084121.3-201ENST00000641716 218 ntBASIC16.29■□□□□ 0.2
CD48P09326 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.29■□□□□ 0.2
CD48P09326 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.29■□□□□ 0.2
CD48P09326 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.29■□□□□ 0.2
CD48P09326 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.29■□□□□ 0.2
CD48P09326 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CD48P09326 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.29■□□□□ 0.2
CD48P09326 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CD48P09326 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CD48P09326 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CD48P09326 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CD48P09326 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CD48P09326 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CD48P09326 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 AC023024.2-201ENST00000623561 1993 ntBASIC16.28■□□□□ 0.2
CD48P09326 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CD48P09326 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CD48P09326 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.28■□□□□ 0.2
CD48P09326 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CD48P09326 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.28■□□□□ 0.2
CD48P09326 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.28■□□□□ 0.2
CD48P09326 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.28■□□□□ 0.2
CD48P09326 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.28■□□□□ 0.2
CD48P09326 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.28■□□□□ 0.2
CD48P09326 TREML5P-201ENST00000421694 576 ntBASIC16.28■□□□□ 0.2
CD48P09326 METTL21AP1-201ENST00000438852 635 ntBASIC16.28■□□□□ 0.2
CD48P09326 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.28■□□□□ 0.2
CD48P09326 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.28■□□□□ 0.2
CD48P09326 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 AC069120.2-201ENST00000524091 540 ntBASIC16.28■□□□□ 0.2
CD48P09326 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.28■□□□□ 0.2
CD48P09326 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.28■□□□□ 0.2
CD48P09326 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.28■□□□□ 0.2
CD48P09326 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.28■□□□□ 0.2
CD48P09326 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.28■□□□□ 0.2
CD48P09326 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CD48P09326 TCAF2P1-201ENST00000291129 2421 ntBASIC16.28■□□□□ 0.2
CD48P09326 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.28■□□□□ 0.2
CD48P09326 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.28■□□□□ 0.2
CD48P09326 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.28■□□□□ 0.2
CD48P09326 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.28■□□□□ 0.2
CD48P09326 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CD48P09326 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.28■□□□□ 0.2
CD48P09326 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.27■□□□□ 0.2
CD48P09326 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
CD48P09326 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
CD48P09326 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD48P09326 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD48P09326 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD48P09326 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD48P09326 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD48P09326 KRT18P28-201ENST00000453838 1332 ntBASIC16.27■□□□□ 0.2
CD48P09326 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD48P09326 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.27■□□□□ 0.2
CD48P09326 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms