Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 AC024909.3-201ENST00000611513 2257 ntBASIC16.31■□□□□ 0.2
YIPF1Q9Y548 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
YIPF1Q9Y548 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 AL355994.2-201ENST00000447882 704 ntBASIC16.3■□□□□ 0.2
YIPF1Q9Y548 AC022494.1-201ENST00000466044 728 ntBASIC16.3■□□□□ 0.2
YIPF1Q9Y548 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 AC025279.2-201ENST00000569730 653 ntBASIC16.3■□□□□ 0.2
YIPF1Q9Y548 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC16.3■□□□□ 0.2
YIPF1Q9Y548 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 TUBB1P2-201ENST00000422712 1306 ntBASIC16.29■□□□□ 0.2
YIPF1Q9Y548 KRT8P35-201ENST00000483942 1338 ntBASIC16.29■□□□□ 0.2
YIPF1Q9Y548 TUBB1P1-201ENST00000503144 1300 ntBASIC16.29■□□□□ 0.2
YIPF1Q9Y548 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 AC026954.1-201ENST00000429771 1293 ntBASIC16.29■□□□□ 0.2
YIPF1Q9Y548 ACTBP11-201ENST00000436287 1126 ntBASIC16.29■□□□□ 0.2
YIPF1Q9Y548 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 AC079316.1-201ENST00000548397 411 ntBASIC16.29■□□□□ 0.2
YIPF1Q9Y548 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 MIR4525-201ENST00000580000 75 ntBASIC16.29■□□□□ 0.2
YIPF1Q9Y548 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.29■□□□□ 0.2
YIPF1Q9Y548 AP003680.1-201ENST00000598970 3660 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms