Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 AC011477.6-201ENST00000604980 1927 ntBASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DNMT3BQ9UBC3 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 CNN2P8-201ENST00000421872 913 ntBASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 C2orf27AP3-201ENST00000434123 579 ntBASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 RPL13AP20-201ENST00000459725 609 ntBASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 GAPDHP40-201ENST00000505218 1006 ntBASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 AL354718.3-201ENST00000616414 581 ntBASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 CR382287.1-201ENST00000623954 586 ntBASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 AC008687.7-202ENST00000637404 953 ntBASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.32■□□□□ 0.2
DNMT3BQ9UBC3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 PFN1P12-201ENST00000455938 534 ntBASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 AC025279.2-201ENST00000569730 653 ntBASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 MIR4313-201ENST00000580760 101 ntBASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 AC244093.1-201ENST00000610837 814 ntBASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DNMT3BQ9UBC3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.3■□□□□ 0.2
DNMT3BQ9UBC3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.3■□□□□ 0.2
DNMT3BQ9UBC3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNMT3BQ9UBC3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DNMT3BQ9UBC3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DNMT3BQ9UBC3 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.3■□□□□ 0.2
DNMT3BQ9UBC3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.3■□□□□ 0.2
DNMT3BQ9UBC3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms