Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 AL513190.1-201ENST00000621254 727 ntBASIC15.53■□□□□ 0.08
MKS1Q9NXB0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MKS1Q9NXB0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 AL662844.1-201ENST00000546340 181 ntBASIC15.52■□□□□ 0.08
MKS1Q9NXB0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.52■□□□□ 0.08
MKS1Q9NXB0 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MKS1Q9NXB0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
MKS1Q9NXB0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKS1Q9NXB0 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MKS1Q9NXB0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKS1Q9NXB0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MKS1Q9NXB0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKS1Q9NXB0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.52■□□□□ 0.07
MKS1Q9NXB0 CICP11-201ENST00000434745 2827 ntBASIC15.52■□□□□ 0.07
MKS1Q9NXB0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.52■□□□□ 0.07
MKS1Q9NXB0 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.52■□□□□ 0.07
MKS1Q9NXB0 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.52■□□□□ 0.07
MKS1Q9NXB0 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
MKS1Q9NXB0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MKS1Q9NXB0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 AC104109.2-201ENST00000602919 1418 ntBASIC15.51■□□□□ 0.07
MKS1Q9NXB0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 AL671277.1-201ENST00000429656 993 ntBASIC15.51■□□□□ 0.07
MKS1Q9NXB0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 LINC01225-203ENST00000563550 1244 ntBASIC15.51■□□□□ 0.07
MKS1Q9NXB0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MKS1Q9NXB0 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms