Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 MIR122-201ENST00000385044 85 ntBASIC18.88■□□□□ 0.61
RNF216Q9NWF9 BCL2L15-202ENST00000393316 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 LRRC37BP1-201ENST00000398851 714 ntBASIC18.88■□□□□ 0.61
RNF216Q9NWF9 LINC00982-205ENST00000420957 435 ntBASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 HTR5BP-201ENST00000430851 1154 ntBASIC18.88■□□□□ 0.61
RNF216Q9NWF9 MTND2P5-201ENST00000432656 1006 ntBASIC18.88■□□□□ 0.61
RNF216Q9NWF9 RPL7P34-201ENST00000433316 712 ntBASIC18.88■□□□□ 0.61
RNF216Q9NWF9 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AC012462.1-201ENST00000447835 825 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 PDLIM5-208ENST00000504489 538 ntTSL 4 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AC108471.2-205ENST00000529314 628 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 PSMA3-AS1-208ENST00000555275 903 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AC124283.3-201ENST00000570869 594 ntBASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 BX255925.2-201ENST00000605600 515 ntBASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AC108747.1-201ENST00000609508 535 ntBASIC18.88■□□□□ 0.61
RNF216Q9NWF9 PSMC1P6-201ENST00000477233 1319 ntBASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AL008638.4-201ENST00000624792 1315 ntBASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 AC105020.1-201ENST00000435356 2205 ntBASIC18.88■□□□□ 0.61
RNF216Q9NWF9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF216Q9NWF9 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 HCFC2P1-201ENST00000392864 1592 ntBASIC18.87■□□□□ 0.61
RNF216Q9NWF9 LDHAP7-201ENST00000398295 965 ntBASIC18.87■□□□□ 0.61
RNF216Q9NWF9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 PTCHD3P3-201ENST00000403073 906 ntBASIC18.87■□□□□ 0.61
RNF216Q9NWF9 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 AC107081.1-201ENST00000414975 361 ntBASIC18.87■□□□□ 0.61
RNF216Q9NWF9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 SGO1-210ENST00000443724 931 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 AC023590.1-203ENST00000449065 411 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 AC073651.1-201ENST00000544015 465 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 AC145350.1-201ENST00000567426 208 ntBASIC18.87■□□□□ 0.61
RNF216Q9NWF9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF216Q9NWF9 MIR4469-201ENST00000583919 79 ntBASIC18.87■□□□□ 0.61
RNF216Q9NWF9 AL353600.1-201ENST00000608148 251 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms