Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC025181.2-201ENST00000606994 802 ntBASIC16.41■□□□□ 0.22
SMOQ99835 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.41■□□□□ 0.22
SMOQ99835 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.41■□□□□ 0.22
SMOQ99835 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.41■□□□□ 0.22
SMOQ99835 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.41■□□□□ 0.22
SMOQ99835 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
SMOQ99835 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
SMOQ99835 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.4■□□□□ 0.22
SMOQ99835 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.4■□□□□ 0.22
SMOQ99835 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.4■□□□□ 0.22
SMOQ99835 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SMOQ99835 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SMOQ99835 AL512384.1-201ENST00000406683 331 ntBASIC16.4■□□□□ 0.22
SMOQ99835 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 RPL13AP25-201ENST00000484130 612 ntBASIC16.4■□□□□ 0.22
SMOQ99835 AC011495.1-201ENST00000498085 584 ntBASIC16.4■□□□□ 0.22
SMOQ99835 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.4■□□□□ 0.22
SMOQ99835 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.4■□□□□ 0.22
SMOQ99835 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.4■□□□□ 0.22
SMOQ99835 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.4■□□□□ 0.22
SMOQ99835 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.4■□□□□ 0.22
SMOQ99835 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.4■□□□□ 0.22
SMOQ99835 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.4■□□□□ 0.22
SMOQ99835 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.4■□□□□ 0.22
SMOQ99835 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SMOQ99835 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SMOQ99835 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.4■□□□□ 0.22
SMOQ99835 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.4■□□□□ 0.22
SMOQ99835 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
SMOQ99835 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.39■□□□□ 0.21
SMOQ99835 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 KRT8P22-201ENST00000562317 1415 ntBASIC16.39■□□□□ 0.21
SMOQ99835 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
SMOQ99835 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.39■□□□□ 0.21
SMOQ99835 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.39■□□□□ 0.21
SMOQ99835 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 C1QBPP1-201ENST00000400117 770 ntBASIC16.39■□□□□ 0.21
SMOQ99835 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.39■□□□□ 0.21
SMOQ99835 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.39■□□□□ 0.21
SMOQ99835 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.39■□□□□ 0.21
SMOQ99835 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.39■□□□□ 0.21
SMOQ99835 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.39■□□□□ 0.21
SMOQ99835 AC107373.2-201ENST00000607735 490 ntBASIC16.39■□□□□ 0.21
SMOQ99835 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.39■□□□□ 0.21
SMOQ99835 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.39■□□□□ 0.21
SMOQ99835 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SMOQ99835 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
SMOQ99835 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.39■□□□□ 0.21
SMOQ99835 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.39■□□□□ 0.21
SMOQ99835 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SMOQ99835 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.39■□□□□ 0.21
SMOQ99835 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.39■□□□□ 0.21
SMOQ99835 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SMOQ99835 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMOQ99835 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms