Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 AZGP1P1-201ENST00000411909 902 ntBASIC15.25■□□□□ 0.03
RNF31Q96EP0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 AP006294.1-201ENST00000415407 339 ntBASIC15.25■□□□□ 0.03
RNF31Q96EP0 DFFBP1-201ENST00000433250 979 ntBASIC15.25■□□□□ 0.03
RNF31Q96EP0 AC114501.2-201ENST00000439631 535 ntBASIC15.25■□□□□ 0.03
RNF31Q96EP0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 AC123567.1-201ENST00000548294 1261 ntBASIC15.25■□□□□ 0.03
RNF31Q96EP0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 AL358472.5-202ENST00000641448 1267 ntBASIC15.25■□□□□ 0.03
RNF31Q96EP0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 AC144831.1-201ENST00000573312 2656 ntBASIC15.25■□□□□ 0.03
RNF31Q96EP0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.25■□□□□ 0.03
RNF31Q96EP0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RNF31Q96EP0 SLC7A15P-201ENST00000424028 1363 ntBASIC15.24■□□□□ 0.03
RNF31Q96EP0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 HIST3H2BA-201ENST00000436555 524 ntBASIC15.24■□□□□ 0.03
RNF31Q96EP0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 GIMAP3P-201ENST00000495150 836 ntBASIC15.24■□□□□ 0.03
RNF31Q96EP0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 IGHV3-71-201ENST00000523324 359 ntBASIC15.24■□□□□ 0.03
RNF31Q96EP0 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 MIR6069-201ENST00000620069 79 ntBASIC15.24■□□□□ 0.03
RNF31Q96EP0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RNF31Q96EP0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
RNF31Q96EP0 AC134407.2-201ENST00000625089 1978 ntBASIC15.24■□□□□ 0.03
RNF31Q96EP0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 AC092384.3-202ENST00000564646 2873 ntBASIC15.23■□□□□ 0.03
RNF31Q96EP0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms