Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 TP53TG3HP-202ENST00000569755 579 ntBASIC16.55■□□□□ 0.24
RNF43Q68DV7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 CDC14C-201ENST00000428251 1719 ntBASIC16.55■□□□□ 0.24
RNF43Q68DV7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.54■□□□□ 0.24
RNF43Q68DV7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.54■□□□□ 0.24
RNF43Q68DV7 AL033527.5-202ENST00000641632 1098 ntBASIC16.54■□□□□ 0.24
RNF43Q68DV7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 AC138969.3-201ENST00000546612 1459 ntBASIC16.54■□□□□ 0.24
RNF43Q68DV7 AC138932.2-201ENST00000548268 1459 ntBASIC16.54■□□□□ 0.24
RNF43Q68DV7 AC126755.4-201ENST00000549796 1459 ntBASIC16.54■□□□□ 0.24
RNF43Q68DV7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF43Q68DV7 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF43Q68DV7 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 AL691432.1-201ENST00000596308 1422 ntBASIC16.53■□□□□ 0.24
RNF43Q68DV7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.53■□□□□ 0.24
RNF43Q68DV7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 SERBP1P3-201ENST00000459980 809 ntBASIC16.53■□□□□ 0.24
RNF43Q68DV7 GIMAP3P-201ENST00000495150 836 ntBASIC16.53■□□□□ 0.24
RNF43Q68DV7 LINC02447-202ENST00000501888 2146 ntBASIC16.53■□□□□ 0.24
RNF43Q68DV7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF43Q68DV7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF43Q68DV7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms