Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 AL606495.2-201ENST00000605867 535 ntBASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 MIR6787-201ENST00000616675 61 ntBASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 RHOXF1P1-202ENST00000635473 501 ntBASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
SHROOM1Q2M3G4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 CICP13-201ENST00000422015 2789 ntBASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 BRWD1P1-201ENST00000401091 371 ntBASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 PRAL-201ENST00000624952 3286 ntBASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.19■□□□□ 0.5
SHROOM1Q2M3G4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 AC099548.2-209ENST00000480264 625 ntBASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 FAM8A2P-201ENST00000528813 1142 ntBASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SHROOM1Q2M3G4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.17■□□□□ 0.5
SHROOM1Q2M3G4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms