Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.82□□□□□ -0.2
TFF3Q07654 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.82□□□□□ -0.2
TFF3Q07654 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.82□□□□□ -0.2
TFF3Q07654 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TFF3Q07654 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
TFF3Q07654 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.82□□□□□ -0.2
TFF3Q07654 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.82□□□□□ -0.2
TFF3Q07654 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.82□□□□□ -0.2
TFF3Q07654 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TFF3Q07654 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.82□□□□□ -0.2
TFF3Q07654 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TFF3Q07654 AC012441.1-201ENST00000446669 685 ntBASIC13.82□□□□□ -0.2
TFF3Q07654 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.82□□□□□ -0.2
TFF3Q07654 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.82□□□□□ -0.2
TFF3Q07654 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.82□□□□□ -0.2
TFF3Q07654 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.82□□□□□ -0.2
TFF3Q07654 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.82□□□□□ -0.2
TFF3Q07654 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.82□□□□□ -0.2
TFF3Q07654 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.82□□□□□ -0.2
TFF3Q07654 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 AC005252.2-201ENST00000624630 1141 ntBASIC13.82□□□□□ -0.2
TFF3Q07654 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TFF3Q07654 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
TFF3Q07654 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.82□□□□□ -0.2
TFF3Q07654 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TFF3Q07654 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TFF3Q07654 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TFF3Q07654 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.81□□□□□ -0.2
TFF3Q07654 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.81□□□□□ -0.2
TFF3Q07654 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TFF3Q07654 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TFF3Q07654 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.81□□□□□ -0.2
TFF3Q07654 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
TFF3Q07654 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 AC136604.1-201ENST00000418535 575 ntBASIC13.81□□□□□ -0.2
TFF3Q07654 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.81□□□□□ -0.2
TFF3Q07654 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.81□□□□□ -0.2
TFF3Q07654 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
TFF3Q07654 VDAC1P7-201ENST00000462417 847 ntBASIC13.81□□□□□ -0.2
TFF3Q07654 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.81□□□□□ -0.2
TFF3Q07654 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.81□□□□□ -0.2
TFF3Q07654 AP001063.1-201ENST00000568332 529 ntBASIC13.81□□□□□ -0.2
TFF3Q07654 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TFF3Q07654 AC103810.3-201ENST00000583567 96 ntBASIC13.81□□□□□ -0.2
TFF3Q07654 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
TFF3Q07654 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.81□□□□□ -0.2
TFF3Q07654 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.81□□□□□ -0.2
TFF3Q07654 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.81□□□□□ -0.2
TFF3Q07654 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.81□□□□□ -0.2
TFF3Q07654 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
TFF3Q07654 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TFF3Q07654 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.8□□□□□ -0.2
TFF3Q07654 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
TFF3Q07654 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
TFF3Q07654 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
TFF3Q07654 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
TFF3Q07654 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms