Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
CLDN12P56749 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.77□□□□□ -0.21
CLDN12P56749 PRELID1P1-202ENST00000567272 903 ntBASIC13.77□□□□□ -0.21
CLDN12P56749 AC002347.1-201ENST00000569543 541 ntBASIC13.77□□□□□ -0.21
CLDN12P56749 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.77□□□□□ -0.21
CLDN12P56749 MIR4313-201ENST00000580760 101 ntBASIC13.77□□□□□ -0.21
CLDN12P56749 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
CLDN12P56749 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
CLDN12P56749 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CLDN12P56749 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN12P56749 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
CLDN12P56749 INTS4P1-203ENST00000641008 3683 ntBASIC13.76□□□□□ -0.21
CLDN12P56749 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN12P56749 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN12P56749 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN12P56749 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN12P56749 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLDN12P56749 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CLDN12P56749 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN12P56749 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN12P56749 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
CLDN12P56749 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.76□□□□□ -0.21
CLDN12P56749 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN12P56749 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN12P56749 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CLDN12P56749 HNRNPDP1-201ENST00000439535 754 ntBASIC13.76□□□□□ -0.21
CLDN12P56749 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.76□□□□□ -0.21
CLDN12P56749 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN12P56749 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN12P56749 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLDN12P56749 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CLDN12P56749 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN12P56749 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN12P56749 AL009183.1-201ENST00000603760 355 ntBASIC13.76□□□□□ -0.21
CLDN12P56749 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN12P56749 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.76□□□□□ -0.21
CLDN12P56749 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CLDN12P56749 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.76□□□□□ -0.21
CLDN12P56749 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN12P56749 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN12P56749 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 PMS2P7-201ENST00000506558 1336 ntBASIC13.75□□□□□ -0.21
CLDN12P56749 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN12P56749 AC026396.1-201ENST00000419388 421 ntBASIC13.75□□□□□ -0.21
CLDN12P56749 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 FAM210CP-201ENST00000445714 574 ntBASIC13.75□□□□□ -0.21
CLDN12P56749 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLDN12P56749 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.75□□□□□ -0.21
CLDN12P56749 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.75□□□□□ -0.21
CLDN12P56749 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.75□□□□□ -0.21
CLDN12P56749 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.75□□□□□ -0.21
CLDN12P56749 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CLDN12P56749 LINC01711-201ENST00000598340 967 ntBASIC13.75□□□□□ -0.21
CLDN12P56749 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 AC005840.4-201ENST00000541242 2494 ntBASIC13.75□□□□□ -0.21
CLDN12P56749 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
CLDN12P56749 LINC01230-201ENST00000625222 3017 ntBASIC13.75□□□□□ -0.21
CLDN12P56749 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
CLDN12P56749 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CLDN12P56749 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms