Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
EPHB4P54760 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.72■□□□□ 0.43
EPHB4P54760 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHB4P54760 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHB4P54760 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHB4P54760 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.71■□□□□ 0.43
EPHB4P54760 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
EPHB4P54760 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHB4P54760 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 AC093724.1-201ENST00000448659 1027 ntBASIC17.71■□□□□ 0.43
EPHB4P54760 AC007551.1-201ENST00000457394 519 ntBASIC17.71■□□□□ 0.43
EPHB4P54760 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
EPHB4P54760 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHB4P54760 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
EPHB4P54760 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHB4P54760 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHB4P54760 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHB4P54760 ARL16-210ENST00000574938 751 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHB4P54760 AC024267.1-201ENST00000582320 895 ntBASIC17.71■□□□□ 0.43
EPHB4P54760 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.71■□□□□ 0.43
EPHB4P54760 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHB4P54760 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC17.71■□□□□ 0.43
EPHB4P54760 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
EPHB4P54760 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
EPHB4P54760 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EPHB4P54760 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.71■□□□□ 0.43
EPHB4P54760 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
EPHB4P54760 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
EPHB4P54760 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
EPHB4P54760 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
EPHB4P54760 TUBB8P12-201ENST00000308911 1335 ntBASIC17.71■□□□□ 0.42
EPHB4P54760 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
EPHB4P54760 TUBB7P-202ENST00000428444 1305 ntBASIC17.71■□□□□ 0.42
EPHB4P54760 TUBB8P7-204ENST00000567960 1332 ntBASIC17.71■□□□□ 0.42
EPHB4P54760 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
EPHB4P54760 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
EPHB4P54760 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.7■□□□□ 0.42
EPHB4P54760 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
EPHB4P54760 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.7■□□□□ 0.42
EPHB4P54760 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.7■□□□□ 0.42
EPHB4P54760 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.7■□□□□ 0.42
EPHB4P54760 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
EPHB4P54760 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
EPHB4P54760 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.7■□□□□ 0.42
EPHB4P54760 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
EPHB4P54760 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.7■□□□□ 0.42
EPHB4P54760 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.7■□□□□ 0.42
EPHB4P54760 AC104596.2-201ENST00000512793 793 ntBASIC17.7■□□□□ 0.42
EPHB4P54760 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.7■□□□□ 0.42
EPHB4P54760 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.7■□□□□ 0.42
EPHB4P54760 MIR5189-201ENST00000577370 114 ntBASIC17.7■□□□□ 0.42
EPHB4P54760 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.7■□□□□ 0.42
EPHB4P54760 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.7■□□□□ 0.42
EPHB4P54760 AC025048.3-201ENST00000590609 569 ntBASIC17.7■□□□□ 0.42
EPHB4P54760 AC026979.3-201ENST00000607315 403 ntBASIC17.7■□□□□ 0.42
EPHB4P54760 AC005702.4-201ENST00000618393 416 ntBASIC17.7■□□□□ 0.42
EPHB4P54760 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
EPHB4P54760 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
EPHB4P54760 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
EPHB4P54760 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
EPHB4P54760 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.7■□□□□ 0.42
EPHB4P54760 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.7■□□□□ 0.42
EPHB4P54760 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.7■□□□□ 0.42
EPHB4P54760 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
EPHB4P54760 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.7■□□□□ 0.42
EPHB4P54760 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms