Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 KRT8P37-201ENST00000451609 1420 ntBASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AC105250.1-201ENST00000509378 2057 ntBASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AC022532.1-201ENST00000624563 1728 ntBASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AC090616.6-203ENST00000579186 1945 ntBASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 YBX1P5-201ENST00000509441 847 ntBASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AC093520.2-201ENST00000561830 333 ntBASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 MIR4313-201ENST00000580760 101 ntBASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AC026979.3-201ENST00000607315 403 ntBASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AC103702.1-201ENST00000548801 2630 ntBASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.14□□□□□ -0.31
IGHV3-43DP0DP04 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 AC211486.1-202ENST00000416371 468 ntBASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 UPF3AP3-201ENST00000420996 769 ntBASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 AL353705.2-201ENST00000428243 662 ntBASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 AC211476.1-201ENST00000503899 468 ntBASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 AL450472.2-201ENST00000603663 1156 ntBASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 AC084121.4-201ENST00000641598 221 ntBASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 AF228730.8-201ENST00000642140 221 ntBASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
IGHV3-43DP0DP04 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms