Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.2■□□□□ 0.02
CPNE3O75131 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.2■□□□□ 0.02
CPNE3O75131 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE3O75131 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.2■□□□□ 0.02
CPNE3O75131 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.2■□□□□ 0.02
CPNE3O75131 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.2■□□□□ 0.02
CPNE3O75131 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE3O75131 AC004790.1-201ENST00000612686 536 ntBASIC15.2■□□□□ 0.02
CPNE3O75131 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.2■□□□□ 0.02
CPNE3O75131 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CPNE3O75131 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 AL513523.2-202ENST00000427283 2040 ntBASIC15.2■□□□□ 0.02
CPNE3O75131 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CPNE3O75131 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE3O75131 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.2■□□□□ 0.02
CPNE3O75131 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CPNE3O75131 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE3O75131 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CPNE3O75131 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.2■□□□□ 0.02
CPNE3O75131 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.2■□□□□ 0.02
CPNE3O75131 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CPNE3O75131 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.19■□□□□ 0.02
CPNE3O75131 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
CPNE3O75131 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CPNE3O75131 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.19■□□□□ 0.02
CPNE3O75131 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CPNE3O75131 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.19■□□□□ 0.02
CPNE3O75131 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CPNE3O75131 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 AC099063.4-201ENST00000641099 1602 ntBASIC15.19■□□□□ 0.02
CPNE3O75131 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE3O75131 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.19■□□□□ 0.02
CPNE3O75131 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.19■□□□□ 0.02
CPNE3O75131 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.19■□□□□ 0.02
CPNE3O75131 TIMM17BP1-201ENST00000545713 516 ntBASIC15.19■□□□□ 0.02
CPNE3O75131 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CPNE3O75131 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
CPNE3O75131 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.19■□□□□ 0.02
CPNE3O75131 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.19■□□□□ 0.02
CPNE3O75131 RN7SL371P-201ENST00000578099 267 ntBASIC15.19■□□□□ 0.02
CPNE3O75131 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.19■□□□□ 0.02
CPNE3O75131 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
CPNE3O75131 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 AC025048.3-201ENST00000590609 569 ntBASIC15.19■□□□□ 0.02
CPNE3O75131 AC005702.4-201ENST00000618393 416 ntBASIC15.19■□□□□ 0.02
CPNE3O75131 AC007431.3-201ENST00000623221 587 ntBASIC15.19■□□□□ 0.02
CPNE3O75131 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE3O75131 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CPNE3O75131 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CPNE3O75131 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.19■□□□□ 0.02
CPNE3O75131 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE3O75131 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.19■□□□□ 0.02
CPNE3O75131 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.19■□□□□ 0.02
CPNE3O75131 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.18■□□□□ 0.02
CPNE3O75131 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
CPNE3O75131 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CPNE3O75131 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CPNE3O75131 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE3O75131 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms