Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SLC28A1O00337 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC28A1O00337 AZGP1P1-201ENST00000411909 902 ntBASIC15.19■□□□□ 0.02
SLC28A1O00337 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC28A1O00337 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC28A1O00337 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SLC28A1O00337 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SLC28A1O00337 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC28A1O00337 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC28A1O00337 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC28A1O00337 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC28A1O00337 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC28A1O00337 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC28A1O00337 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 AC007326.2-201ENST00000624224 7579 ntBASIC15.19■□□□□ 0.02
SLC28A1O00337 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC28A1O00337 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC28A1O00337 AL607033.1-201ENST00000623900 1599 ntBASIC15.19■□□□□ 0.02
SLC28A1O00337 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SLC28A1O00337 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC28A1O00337 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.19■□□□□ 0.02
SLC28A1O00337 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC28A1O00337 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.18■□□□□ 0.02
SLC28A1O00337 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC28A1O00337 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC28A1O00337 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC28A1O00337 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SLC28A1O00337 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC28A1O00337 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC28A1O00337 ELL2P1-201ENST00000413990 1906 ntBASIC15.18■□□□□ 0.02
SLC28A1O00337 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC28A1O00337 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
SLC28A1O00337 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC28A1O00337 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 MIR574-201ENST00000385209 96 ntBASIC15.18■□□□□ 0.02
SLC28A1O00337 AC005237.2-201ENST00000434368 219 ntBASIC15.18■□□□□ 0.02
SLC28A1O00337 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC28A1O00337 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SLC28A1O00337 AC105339.1-204ENST00000636249 355 ntBASIC15.18■□□□□ 0.02
SLC28A1O00337 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
SLC28A1O00337 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC28A1O00337 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC28A1O00337 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC28A1O00337 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC28A1O00337 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC28A1O00337 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SLC28A1O00337 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A1O00337 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A1O00337 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC28A1O00337 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC28A1O00337 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A1O00337 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A1O00337 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC28A1O00337 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC28A1O00337 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC28A1O00337 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A1O00337 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC28A1O00337 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A1O00337 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC28A1O00337 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A1O00337 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC28A1O00337 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A1O00337 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A1O00337 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A1O00337 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A1O00337 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC28A1O00337 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.17■□□□□ 0.02
SLC28A1O00337 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
SLC28A1O00337 FO393414.2-201ENST00000405153 598 ntBASIC15.17■□□□□ 0.02
SLC28A1O00337 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC28A1O00337 CEND1P1-201ENST00000451006 455 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms