Protein–RNA interactions for Protein: Q9Y2R4

DDX52, Probable ATP-dependent RNA helicase DDX52, humanhuman

Known RBP eCLIP

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX52Q9Y2R4 LASP1-204ENST00000435347 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.368e-6■■■□□ 18.6
DDX52Q9Y2R4 LASP1-203ENST00000433206 4023 ntTSL 2 BASIC11.89□□□□□ -0.518e-6■■■□□ 18.6
DDX52Q9Y2R4 LASP1-201ENST00000318008 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.578e-6■■■□□ 18.6
DDX52Q9Y2R4 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.648e-6■■■□□ 18.6
DDX52Q9Y2R4 RPS6KA3-206ENST00000492128 553 ntTSL 410.86□□□□□ -0.678e-6■■■□□ 18.6
DDX52Q9Y2R4 ROR2-208ENST00000550066 4360 ntTSL 210.8□□□□□ -0.688e-6■■■□□ 18.6
DDX52Q9Y2R4 GPX4-204ENST00000587648 536 ntTSL 210.72□□□□□ -0.698e-6■■■□□ 18.6
DDX52Q9Y2R4 RER1-205ENST00000443438 540 ntTSL 210.07□□□□□ -0.88e-6■■■□□ 18.6
DDX52Q9Y2R4 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC9.88□□□□□ -0.838e-6■■■□□ 18.6
DDX52Q9Y2R4 ATP11A-205ENST00000419448 435 ntTSL 39.37□□□□□ -0.918e-6■■■□□ 18.6
DDX52Q9Y2R4 IGF1R-206ENST00000558762 11726 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.18e-6■■■□□ 18.6
DDX52Q9Y2R4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.5□□□□□ -1.538e-6■■■□□ 18.6
DDX52Q9Y2R4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.48□□□□□ -1.538e-6■■■□□ 18.6
DDX52Q9Y2R4 THUMPD3-AS1-218ENST00000522525 1867 ntTSL 1 (best)5.08□□□□□ -1.68e-6■■■□□ 18.6
DDX52Q9Y2R4 THUMPD3-AS1-204ENST00000480904 493 ntTSL 34.95□□□□□ -1.628e-6■■■□□ 18.6
DDX52Q9Y2R4 THUMPD3-AS1-216ENST00000521708 549 ntTSL 34.73□□□□□ -1.658e-6■■■□□ 18.6
DDX52Q9Y2R4 THUMPD3-AS1-201ENST00000467069 667 ntTSL 54.57□□□□□ -1.688e-6■■■□□ 18.6
DDX52Q9Y2R4 THUMPD3-AS1-207ENST00000494680 544 ntTSL 54.33□□□□□ -1.728e-6■■■□□ 18.6
DDX52Q9Y2R4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.193e-6■■■□□ 18.6
DDX52Q9Y2R4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.32■■□□□ 1.483e-6■■■□□ 18.6
DDX52Q9Y2R4 RNASET2-204ENST00000421787 1924 ntTSL 223.94■■□□□ 1.423e-6■■■□□ 18.6
DDX52Q9Y2R4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.61■■□□□ 1.373e-6■■■□□ 18.6
DDX52Q9Y2R4 RNASET2-201ENST00000028008 1220 ntTSL 521.87■■□□□ 1.093e-6■■■□□ 18.6
DDX52Q9Y2R4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.83■■□□□ 1.093e-6■■■□□ 18.6
DDX52Q9Y2R4 RNASET2-207ENST00000478180 963 ntTSL 521.5■■□□□ 1.033e-6■■■□□ 18.6
DDX52Q9Y2R4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.83e-6■■■□□ 18.6
DDX52Q9Y2R4 RNASET2-202ENST00000358165 2445 ntTSL 219.5■□□□□ 0.713e-6■■■□□ 18.6
DDX52Q9Y2R4 AGAP3-221ENST00000490097 604 ntTSL 417.95■□□□□ 0.462e-6■■■□□ 18.6
DDX52Q9Y2R4 EDA-202ENST00000374548 1116 ntTSL 1 (best)30.45■■■□□ 2.471e-21■■■□□ 18.6
DDX52Q9Y2R4 EDA-212ENST00000533317 1462 ntTSL 1 (best)27.4■■□□□ 1.981e-21■■■□□ 18.6
DDX52Q9Y2R4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.93■■□□□ 1.581e-21■■■□□ 18.6
DDX52Q9Y2R4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.93■■□□□ 1.581e-21■■■□□ 18.6
DDX52Q9Y2R4 EDA-205ENST00000502251 1167 ntTSL 1 (best)24.93■■□□□ 1.581e-21■■■□□ 18.6
DDX52Q9Y2R4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.9■■□□□ 1.261e-21■■■□□ 18.6
DDX52Q9Y2R4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.471e-21■■■□□ 18.6
DDX52Q9Y2R4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.461e-21■■■□□ 18.6
DDX52Q9Y2R4 EDA-206ENST00000503592 557 ntTSL 58.06□□□□□ -1.121e-21■■■□□ 18.6
DDX52Q9Y2R4 EDA-211ENST00000530321 339 ntTSL 23.85□□□□□ -1.791e-21■■■□□ 18.6
DDX52Q9Y2R4 EDA-207ENST00000510681 536 ntTSL 43.64□□□□□ -1.831e-21■■■□□ 18.6
DDX52Q9Y2R4 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.28■■■□□ 2.62e-6■■■□□ 18.5
DDX52Q9Y2R4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.69■■■□□ 2.52e-6■■■□□ 18.5
DDX52Q9Y2R4 AGAP3-209ENST00000469901 582 ntTSL 323.47■■□□□ 1.352e-6■■■□□ 18.5
DDX52Q9Y2R4 PKP4-204ENST00000421462 3099 ntTSL 218.17■□□□□ 0.52e-6■■■□□ 18.5
DDX52Q9Y2R4 GUK1-226ENST00000484953 273 ntTSL 216.75■□□□□ 0.271e-6■■■□□ 18.5
DDX52Q9Y2R4 GUK1-233ENST00000491613 959 ntTSL 316.25■□□□□ 0.191e-6■■■□□ 18.5
DDX52Q9Y2R4 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.32e-7■■■□□ 18.5
DDX52Q9Y2R4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.444e-6■■■□□ 18.5
DDX52Q9Y2R4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.924e-6■■■□□ 18.5
DDX52Q9Y2R4 STK11-206ENST00000586358 770 ntTSL 517.79■□□□□ 0.444e-6■■■□□ 18.5
DDX52Q9Y2R4 STK11-209ENST00000593219 637 ntTSL 316.31■□□□□ 0.24e-6■■■□□ 18.5
DDX52Q9Y2R4 STK11-203ENST00000585748 746 ntTSL 316.05■□□□□ 0.164e-6■■■□□ 18.5
DDX52Q9Y2R4 STK11-204ENST00000585851 505 ntTSL 315.86■□□□□ 0.134e-6■■■□□ 18.5
DDX52Q9Y2R4 STK11-207ENST00000589152 3365 ntTSL 215.73■□□□□ 0.114e-6■■■□□ 18.5
DDX52Q9Y2R4 KLHDC4-218ENST00000567298 4572 ntTSL 515.05■□□□□ -03e-6■■■□□ 18.5
DDX52Q9Y2R4 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC33.24■■■□□ 2.913e-6■■■□□ 18.4
DDX52Q9Y2R4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.13■■■□□ 2.413e-6■■■□□ 18.4
DDX52Q9Y2R4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.68■■□□□ 1.223e-6■■■□□ 18.4
DDX52Q9Y2R4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.893e-6■■■□□ 18.4
DDX52Q9Y2R4 SSBP3-210ENST00000525990 701 ntTSL 214.36□□□□□ -0.113e-6■■■□□ 18.4
DDX52Q9Y2R4 ANKRD11-211ENST00000566973 442 ntTSL 224.04■■□□□ 1.444e-8■■■□□ 18.4
DDX52Q9Y2R4 GAK-219ENST00000512325 577 ntTSL 325.05■■□□□ 1.63e-6■■■□□ 18.4
DDX52Q9Y2R4 GAK-209ENST00000507580 468 ntTSL 425.05■■□□□ 1.63e-6■■■□□ 18.4
DDX52Q9Y2R4 GAK-207ENST00000505819 1326 ntTSL 524.99■■□□□ 1.593e-6■■■□□ 18.4
DDX52Q9Y2R4 GAK-202ENST00000502656 554 ntTSL 423.22■■□□□ 1.313e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-234ENST00000492871 1065 ntTSL 330.73■■■□□ 2.512e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-215ENST00000462807 628 ntTSL 230.59■■■□□ 2.492e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-227ENST00000485083 871 ntTSL 329.56■■■□□ 2.322e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-235ENST00000493138 694 ntTSL 329.56■■■□□ 2.322e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.63■■■□□ 2.172e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.09■■□□□ 1.772e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.52■■□□□ 1.682e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-213ENST00000453943 656 ntTSL 1 (best)24.93■■□□□ 1.582e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.96■■□□□ 1.432e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.422e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-236ENST00000493209 735 ntTSL 522.68■■□□□ 1.222e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC22.14■■□□□ 1.132e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-230ENST00000485838 774 ntTSL 321.59■■□□□ 1.052e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.622e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-238ENST00000498092 865 ntTSL 518.4■□□□□ 0.542e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC18■□□□□ 0.472e-6■■■□□ 18.4
DDX52Q9Y2R4 GUK1-212ENST00000435153 865 ntTSL 314.64□□□□□ -0.072e-6■■■□□ 18.4
DDX52Q9Y2R4 ERCC1-204ENST00000423698 3119 ntTSL 2 BASIC13.21□□□□□ -0.293e-29■■■□□ 18.4
DDX52Q9Y2R4 SEMA4C-206ENST00000482925 3776 ntTSL 214.56□□□□□ -0.082e-6■■■□□ 18.3
DDX52Q9Y2R4 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC14.46□□□□□ -0.092e-6■■■□□ 18.3
DDX52Q9Y2R4 DAZAP1-209ENST00000590419 508 ntTSL 317.34■□□□□ 0.374e-7■■■□□ 18.3
DDX52Q9Y2R4 EGFL7-206ENST00000492002 654 ntTSL 527.56■■■□□ 23e-7■■■□□ 18.3
DDX52Q9Y2R4 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.423e-7■■■□□ 18.3
DDX52Q9Y2R4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.092e-6■■■□□ 18.3
DDX52Q9Y2R4 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 02e-6■■■□□ 18.3
DDX52Q9Y2R4 UBE2J2-209ENST00000461142 837 ntTSL 325.92■■□□□ 1.744e-6■■■□□ 18.3
DDX52Q9Y2R4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.18■■□□□ 1.788e-7■■■□□ 18.3
DDX52Q9Y2R4 D2HGDH-202ENST00000400769 2277 ntTSL 226.03■■□□□ 1.768e-7■■■□□ 18.3
DDX52Q9Y2R4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.328e-7■■■□□ 18.3
DDX52Q9Y2R4 D2HGDH-206ENST00000436747 4549 ntTSL 1 (best)18.82■□□□□ 0.68e-7■■■□□ 18.3
DDX52Q9Y2R4 BCR-204ENST00000427791 771 ntTSL 1 (best)15.31■□□□□ 0.042e-15■■■□□ 18.2
DDX52Q9Y2R4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC22.3■■□□□ 1.163e-6■■■□□ 18.1
DDX52Q9Y2R4 GPX4-209ENST00000593032 583 ntTSL 321.99■■□□□ 1.113e-6■■■□□ 18.1
DDX52Q9Y2R4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.083e-6■■■□□ 18.1
DDX52Q9Y2R4 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.4■■□□□ 1.023e-6■■■□□ 18.1
DDX52Q9Y2R4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.883e-6■■■□□ 18.1
Retrieved 100 of 4,483 protein–RNA pairs in 78.3 ms