Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RNF183Q96D59 MIR4787-201ENST00000607364 84 ntBASIC17.16■□□□□ 0.34
RNF183Q96D59 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF183Q96D59 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF183Q96D59 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF183Q96D59 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF183Q96D59 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF183Q96D59 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF183Q96D59 AC010501.1-201ENST00000606270 1962 ntBASIC17.15■□□□□ 0.34
RNF183Q96D59 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF183Q96D59 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF183Q96D59 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF183Q96D59 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.15■□□□□ 0.34
RNF183Q96D59 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF183Q96D59 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF183Q96D59 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
RNF183Q96D59 AC097639.1-201ENST00000565519 1891 ntBASIC17.15■□□□□ 0.34
RNF183Q96D59 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF183Q96D59 FOXO3B-201ENST00000395675 1928 ntBASIC17.15■□□□□ 0.34
RNF183Q96D59 AC096887.2-201ENST00000623443 1957 ntBASIC17.15■□□□□ 0.34
RNF183Q96D59 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF183Q96D59 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF183Q96D59 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.14■□□□□ 0.34
RNF183Q96D59 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF183Q96D59 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF183Q96D59 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF183Q96D59 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF183Q96D59 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF183Q96D59 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF183Q96D59 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.14■□□□□ 0.33
RNF183Q96D59 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF183Q96D59 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF183Q96D59 MIR4281-201ENST00000580852 62 ntBASIC17.14■□□□□ 0.33
RNF183Q96D59 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.14■□□□□ 0.33
RNF183Q96D59 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF183Q96D59 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF183Q96D59 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RNF183Q96D59 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF183Q96D59 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF183Q96D59 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF183Q96D59 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF183Q96D59 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF183Q96D59 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF183Q96D59 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF183Q96D59 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
RNF183Q96D59 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RNF183Q96D59 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF183Q96D59 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF183Q96D59 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RNF183Q96D59 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF183Q96D59 AC092803.2-201ENST00000564287 1899 ntBASIC17.13■□□□□ 0.33
RNF183Q96D59 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF183Q96D59 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF183Q96D59 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF183Q96D59 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF183Q96D59 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF183Q96D59 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RNF183Q96D59 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF183Q96D59 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF183Q96D59 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF183Q96D59 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF183Q96D59 AL356441.2-201ENST00000443009 864 ntBASIC17.12■□□□□ 0.33
RNF183Q96D59 CREM-229ENST00000474362 1030 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF183Q96D59 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF183Q96D59 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF183Q96D59 AC021242.3-201ENST00000607598 1377 ntBASIC17.12■□□□□ 0.33
RNF183Q96D59 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RNF183Q96D59 AC091060.1-201ENST00000623524 1766 ntBASIC17.12■□□□□ 0.33
RNF183Q96D59 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RNF183Q96D59 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.12■□□□□ 0.33
RNF183Q96D59 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF183Q96D59 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF183Q96D59 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF183Q96D59 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF183Q96D59 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF183Q96D59 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.11■□□□□ 0.33
RNF183Q96D59 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RNF183Q96D59 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RNF183Q96D59 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF183Q96D59 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF183Q96D59 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF183Q96D59 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF183Q96D59 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF183Q96D59 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.1■□□□□ 0.33
RNF183Q96D59 AC131212.1-201ENST00000613771 668 ntBASIC17.1■□□□□ 0.33
RNF183Q96D59 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RNF183Q96D59 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RNF183Q96D59 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.1■□□□□ 0.33
RNF183Q96D59 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RNF183Q96D59 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF183Q96D59 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF183Q96D59 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RNF183Q96D59 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF183Q96D59 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF183Q96D59 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF183Q96D59 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF183Q96D59 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.09■□□□□ 0.33
RNF183Q96D59 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC17.09■□□□□ 0.33
RNF183Q96D59 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RNF183Q96D59 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms