Protein–RNA interactions for Protein: Q06507

Atf4, Cyclic AMP-dependent transcription factor ATF-4, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf4Q06507 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Atf4Q06507 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.71■□□□□ 0.75
Atf4Q06507 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.71■□□□□ 0.75
Atf4Q06507 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atf4Q06507 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.71■□□□□ 0.75
Atf4Q06507 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Atf4Q06507 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Atf4Q06507 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Atf4Q06507 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Atf4Q06507 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.74
Atf4Q06507 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atf4Q06507 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.7■□□□□ 0.74
Atf4Q06507 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atf4Q06507 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Atf4Q06507 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Atf4Q06507 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf4Q06507 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Atf4Q06507 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.69■□□□□ 0.74
Atf4Q06507 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf4Q06507 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf4Q06507 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf4Q06507 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Atf4Q06507 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf4Q06507 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf4Q06507 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf4Q06507 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Atf4Q06507 Gm10399-202ENSMUST00000202768 748 ntBASIC19.68■□□□□ 0.74
Atf4Q06507 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Atf4Q06507 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf4Q06507 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf4Q06507 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf4Q06507 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf4Q06507 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Atf4Q06507 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Atf4Q06507 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Atf4Q06507 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf4Q06507 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Atf4Q06507 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.67■□□□□ 0.74
Atf4Q06507 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf4Q06507 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf4Q06507 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.67■□□□□ 0.74
Atf4Q06507 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Atf4Q06507 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf4Q06507 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Atf4Q06507 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Atf4Q06507 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atf4Q06507 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atf4Q06507 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atf4Q06507 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.66■□□□□ 0.74
Atf4Q06507 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atf4Q06507 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Atf4Q06507 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atf4Q06507 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atf4Q06507 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Atf4Q06507 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Atf4Q06507 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.65■□□□□ 0.74
Atf4Q06507 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.65■□□□□ 0.74
Atf4Q06507 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf4Q06507 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Atf4Q06507 Gm45417-201ENSMUST00000209533 758 ntBASIC19.65■□□□□ 0.74
Atf4Q06507 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf4Q06507 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf4Q06507 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Atf4Q06507 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Atf4Q06507 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf4Q06507 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Atf4Q06507 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf4Q06507 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf4Q06507 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Atf4Q06507 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf4Q06507 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Atf4Q06507 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Atf4Q06507 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Atf4Q06507 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf4Q06507 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf4Q06507 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Atf4Q06507 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf4Q06507 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf4Q06507 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Atf4Q06507 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf4Q06507 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.62■□□□□ 0.73
Atf4Q06507 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf4Q06507 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf4Q06507 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atf4Q06507 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf4Q06507 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Atf4Q06507 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf4Q06507 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf4Q06507 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf4Q06507 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Atf4Q06507 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Atf4Q06507 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf4Q06507 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.61■□□□□ 0.73
Atf4Q06507 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.61■□□□□ 0.73
Atf4Q06507 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.61■□□□□ 0.73
Atf4Q06507 Golgb1-201ENSMUST00000023534 498 ntBASIC19.61■□□□□ 0.73
Atf4Q06507 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf4Q06507 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Atf4Q06507 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Atf4Q06507 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms