Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TcraP01849 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TcraP01849 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TcraP01849 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TcraP01849 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TcraP01849 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
TcraP01849 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TcraP01849 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TcraP01849 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TcraP01849 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TcraP01849 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TcraP01849 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TcraP01849 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC15.22■□□□□ 0.03
TcraP01849 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TcraP01849 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
TcraP01849 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TcraP01849 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TcraP01849 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TcraP01849 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TcraP01849 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TcraP01849 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TcraP01849 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TcraP01849 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TcraP01849 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TcraP01849 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TcraP01849 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TcraP01849 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TcraP01849 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC15.21■□□□□ 0.03
TcraP01849 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC15.21■□□□□ 0.03
TcraP01849 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TcraP01849 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.21■□□□□ 0.03
TcraP01849 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TcraP01849 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TcraP01849 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TcraP01849 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.21■□□□□ 0.02
TcraP01849 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
TcraP01849 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC15.2■□□□□ 0.02
TcraP01849 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TcraP01849 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TcraP01849 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.19■□□□□ 0.02
TcraP01849 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC15.19■□□□□ 0.02
TcraP01849 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TcraP01849 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
TcraP01849 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TcraP01849 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TcraP01849 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TcraP01849 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TcraP01849 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TcraP01849 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TcraP01849 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TcraP01849 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TcraP01849 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TcraP01849 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TcraP01849 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TcraP01849 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TcraP01849 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TcraP01849 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TcraP01849 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TcraP01849 Gm10616-201ENSMUST00000205285 2127 ntBASIC15.17■□□□□ 0.02
TcraP01849 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.17■□□□□ 0.02
TcraP01849 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TcraP01849 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TcraP01849 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TcraP01849 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TcraP01849 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TcraP01849 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TcraP01849 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TcraP01849 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TcraP01849 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TcraP01849 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.16■□□□□ 0.02
TcraP01849 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TcraP01849 Gm4430-201ENSMUST00000192413 1943 ntBASIC15.16■□□□□ 0.02
TcraP01849 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TcraP01849 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TcraP01849 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TcraP01849 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms