Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Psmc3O88685 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
Psmc3O88685 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Psmc3O88685 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
Psmc3O88685 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Psmc3O88685 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC22.22■■□□□ 1.15
Psmc3O88685 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Psmc3O88685 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Psmc3O88685 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Psmc3O88685 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Psmc3O88685 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.21■■□□□ 1.15
Psmc3O88685 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Psmc3O88685 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Psmc3O88685 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Psmc3O88685 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Psmc3O88685 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Psmc3O88685 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
Psmc3O88685 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Psmc3O88685 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
Psmc3O88685 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Psmc3O88685 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Psmc3O88685 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Psmc3O88685 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Psmc3O88685 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC22.19■■□□□ 1.14
Psmc3O88685 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Psmc3O88685 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Psmc3O88685 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Psmc3O88685 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Psmc3O88685 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.18■■□□□ 1.14
Psmc3O88685 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Psmc3O88685 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Psmc3O88685 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Psmc3O88685 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.18■■□□□ 1.14
Psmc3O88685 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Psmc3O88685 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Psmc3O88685 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Psmc3O88685 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.17■■□□□ 1.14
Psmc3O88685 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.17■■□□□ 1.14
Psmc3O88685 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC22.17■■□□□ 1.14
Psmc3O88685 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Psmc3O88685 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Psmc3O88685 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Psmc3O88685 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
Psmc3O88685 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Psmc3O88685 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Psmc3O88685 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC22.16■■□□□ 1.14
Psmc3O88685 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Psmc3O88685 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Psmc3O88685 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Psmc3O88685 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Psmc3O88685 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Psmc3O88685 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.15■■□□□ 1.14
Psmc3O88685 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Psmc3O88685 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.15■■□□□ 1.14
Psmc3O88685 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Psmc3O88685 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Psmc3O88685 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Psmc3O88685 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.15■■□□□ 1.14
Psmc3O88685 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Psmc3O88685 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Psmc3O88685 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
Psmc3O88685 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Psmc3O88685 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Psmc3O88685 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Psmc3O88685 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Psmc3O88685 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Psmc3O88685 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Psmc3O88685 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Psmc3O88685 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Psmc3O88685 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Psmc3O88685 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Psmc3O88685 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Psmc3O88685 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Psmc3O88685 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Psmc3O88685 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Psmc3O88685 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Psmc3O88685 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Psmc3O88685 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Psmc3O88685 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Psmc3O88685 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.11■■□□□ 1.13
Psmc3O88685 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Psmc3O88685 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Psmc3O88685 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.11■■□□□ 1.13
Psmc3O88685 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
Psmc3O88685 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
Psmc3O88685 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.1■■□□□ 1.13
Psmc3O88685 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Psmc3O88685 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Psmc3O88685 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.1■■□□□ 1.13
Psmc3O88685 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Psmc3O88685 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Psmc3O88685 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Psmc3O88685 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Psmc3O88685 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Psmc3O88685 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Psmc3O88685 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Psmc3O88685 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Psmc3O88685 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.09■■□□□ 1.13
Psmc3O88685 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Psmc3O88685 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms