Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capns1O88456 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Capns1O88456 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capns1O88456 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Capns1O88456 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Capns1O88456 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capns1O88456 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capns1O88456 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
Capns1O88456 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capns1O88456 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capns1O88456 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Capns1O88456 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capns1O88456 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capns1O88456 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Capns1O88456 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Capns1O88456 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Capns1O88456 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capns1O88456 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Capns1O88456 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.29■□□□□ 0.68
Capns1O88456 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Capns1O88456 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.29■□□□□ 0.68
Capns1O88456 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.29■□□□□ 0.68
Capns1O88456 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capns1O88456 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capns1O88456 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Capns1O88456 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capns1O88456 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capns1O88456 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Capns1O88456 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.28■□□□□ 0.68
Capns1O88456 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capns1O88456 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capns1O88456 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capns1O88456 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Capns1O88456 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capns1O88456 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capns1O88456 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Capns1O88456 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Capns1O88456 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Capns1O88456 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Capns1O88456 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Capns1O88456 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Capns1O88456 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Capns1O88456 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.27■□□□□ 0.68
Capns1O88456 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Capns1O88456 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Capns1O88456 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Capns1O88456 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Capns1O88456 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Capns1O88456 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Capns1O88456 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Capns1O88456 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Capns1O88456 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Capns1O88456 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Capns1O88456 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.26■□□□□ 0.67
Capns1O88456 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Capns1O88456 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Capns1O88456 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Capns1O88456 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capns1O88456 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Capns1O88456 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Capns1O88456 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capns1O88456 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capns1O88456 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.25■□□□□ 0.67
Capns1O88456 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capns1O88456 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capns1O88456 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capns1O88456 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capns1O88456 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capns1O88456 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capns1O88456 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Capns1O88456 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Capns1O88456 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Capns1O88456 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capns1O88456 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capns1O88456 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capns1O88456 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capns1O88456 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capns1O88456 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Capns1O88456 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capns1O88456 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capns1O88456 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capns1O88456 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Capns1O88456 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Capns1O88456 Gm5921-201ENSMUST00000075898 882 ntBASIC19.23■□□□□ 0.67
Capns1O88456 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Capns1O88456 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Capns1O88456 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Capns1O88456 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Capns1O88456 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Capns1O88456 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Capns1O88456 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Capns1O88456 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capns1O88456 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capns1O88456 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capns1O88456 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capns1O88456 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Capns1O88456 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capns1O88456 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Capns1O88456 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Capns1O88456 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms