Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trove2O08848 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Trove2O08848 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Trove2O08848 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Trove2O08848 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Trove2O08848 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Trove2O08848 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trove2O08848 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trove2O08848 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trove2O08848 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.39■■□□□ 1.01
Trove2O08848 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trove2O08848 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
Trove2O08848 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trove2O08848 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trove2O08848 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trove2O08848 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trove2O08848 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trove2O08848 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trove2O08848 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Trove2O08848 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trove2O08848 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Trove2O08848 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trove2O08848 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.37■■□□□ 1.01
Trove2O08848 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.37■■□□□ 1.01
Trove2O08848 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trove2O08848 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trove2O08848 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trove2O08848 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trove2O08848 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.36■■□□□ 1.01
Trove2O08848 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.36■■□□□ 1.01
Trove2O08848 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trove2O08848 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
Trove2O08848 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trove2O08848 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Trove2O08848 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Trove2O08848 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
Trove2O08848 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trove2O08848 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trove2O08848 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trove2O08848 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trove2O08848 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.35■■□□□ 1.01
Trove2O08848 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trove2O08848 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.34■■□□□ 1.01
Trove2O08848 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Trove2O08848 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trove2O08848 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trove2O08848 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC21.33■■□□□ 1.01
Trove2O08848 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.33■■□□□ 1.01
Trove2O08848 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.33■■□□□ 1
Trove2O08848 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC21.33■■□□□ 1
Trove2O08848 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.33■■□□□ 1
Trove2O08848 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trove2O08848 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Trove2O08848 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trove2O08848 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trove2O08848 Gm11175-201ENSMUST00000116172 543 ntBASIC21.32■■□□□ 1
Trove2O08848 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Trove2O08848 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.32■■□□□ 1
Trove2O08848 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.32■■□□□ 1
Trove2O08848 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.32■■□□□ 1
Trove2O08848 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trove2O08848 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Trove2O08848 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.31■■□□□ 1
Trove2O08848 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Trove2O08848 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.31■■□□□ 1
Trove2O08848 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trove2O08848 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trove2O08848 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trove2O08848 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trove2O08848 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trove2O08848 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trove2O08848 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Trove2O08848 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trove2O08848 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trove2O08848 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Trove2O08848 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trove2O08848 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trove2O08848 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trove2O08848 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trove2O08848 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trove2O08848 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Trove2O08848 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trove2O08848 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.29■■□□□ 1
Trove2O08848 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Trove2O08848 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trove2O08848 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trove2O08848 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Trove2O08848 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trove2O08848 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trove2O08848 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Trove2O08848 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.27■■□□□ 1
Trove2O08848 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trove2O08848 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trove2O08848 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trove2O08848 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trove2O08848 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trove2O08848 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trove2O08848 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.27■■□□□ 1
Trove2O08848 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trove2O08848 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms