Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SYNPO2Q9UMS6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SYNPO2Q9UMS6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 HLA-V-201ENST00000429037 534 ntBASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 DUX4L45-201ENST00000566406 1057 ntBASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 SAMD11P1-201ENST00000571429 661 ntBASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 AC145423.3-201ENST00000615987 467 ntBASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 SERF2-217ENST00000630046 862 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 AL033527.4-201ENST00000641026 673 ntBASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 PCDH8P1-201ENST00000428983 2773 ntBASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SYNPO2Q9UMS6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 AC084018.2-201ENST00000613093 2607 ntBASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 RNU1-114P-201ENST00000365297 166 ntBASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 BNIP3P42-201ENST00000454982 569 ntBASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 AL583810.1-201ENST00000553344 1045 ntBASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 BNIP3P29-201ENST00000598302 571 ntBASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 AC244669.2-201ENST00000612320 853 ntBASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 AC011447.5-201ENST00000616168 564 ntBASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SYNPO2Q9UMS6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 AL365203.3-201ENST00000609742 2057 ntBASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SYNPO2Q9UMS6 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms