Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 PMS2P7-201ENST00000506558 1336 ntBASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHRDL1Q9BU40 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 PRAL-201ENST00000624952 3286 ntBASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 AL355306.1-201ENST00000415580 579 ntBASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 AL671277.1-201ENST00000429656 993 ntBASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 AC002347.1-201ENST00000569543 541 ntBASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 AC092902.6-201ENST00000641783 218 ntBASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CHRDL1Q9BU40 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 MCCD1P2-201ENST00000423228 335 ntBASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 AL135744.1-201ENST00000565098 629 ntBASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 AL671883.3-201ENST00000603274 991 ntBASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms