Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
ZNF48Q96MX3 REXO1L8P-201ENST00000604378 1897 ntBASIC12.85□□□□□ -0.35
ZNF48Q96MX3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 EEF1DP4-201ENST00000446006 880 ntBASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AC007389.4-201ENST00000454674 793 ntBASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AC104596.2-201ENST00000512793 793 ntBASIC12.84□□□□□ -0.35
ZNF48Q96MX3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AC092552.1-201ENST00000547243 906 ntBASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AL603832.2-201ENST00000566195 2125 ntBASIC12.84□□□□□ -0.35
ZNF48Q96MX3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 MIR4259-201ENST00000584466 101 ntBASIC12.84□□□□□ -0.35
ZNF48Q96MX3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AC008735.3-201ENST00000596646 500 ntBASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AL391069.4-201ENST00000609583 481 ntBASIC12.84□□□□□ -0.35
ZNF48Q96MX3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
ZNF48Q96MX3 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC12.83□□□□□ -0.35
ZNF48Q96MX3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
ZNF48Q96MX3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC12.83□□□□□ -0.35
ZNF48Q96MX3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.83□□□□□ -0.35
ZNF48Q96MX3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 KRT8P37-201ENST00000451609 1420 ntBASIC12.83□□□□□ -0.36
ZNF48Q96MX3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 AC074338.1-201ENST00000416825 156 ntBASIC12.83□□□□□ -0.36
ZNF48Q96MX3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.83□□□□□ -0.36
ZNF48Q96MX3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms