Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF43Q68DV7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RNF43Q68DV7 AC112504.1-201ENST00000623415 1841 ntBASIC16.57■□□□□ 0.24
RNF43Q68DV7 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF43Q68DV7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF43Q68DV7 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RNF43Q68DV7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RNF43Q68DV7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF43Q68DV7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF43Q68DV7 HIST3H2BA-201ENST00000436555 524 ntBASIC16.57■□□□□ 0.24
RNF43Q68DV7 AC245100.3-201ENST00000441281 285 ntBASIC16.57■□□□□ 0.24
RNF43Q68DV7 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF43Q68DV7 SPTLC1P1-201ENST00000447199 261 ntBASIC16.57■□□□□ 0.24
RNF43Q68DV7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.57■□□□□ 0.24
RNF43Q68DV7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
RNF43Q68DV7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF43Q68DV7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.57■□□□□ 0.24
RNF43Q68DV7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF43Q68DV7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF43Q68DV7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF43Q68DV7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF43Q68DV7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF43Q68DV7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF43Q68DV7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF43Q68DV7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF43Q68DV7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF43Q68DV7 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF43Q68DV7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF43Q68DV7 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF43Q68DV7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF43Q68DV7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF43Q68DV7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF43Q68DV7 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF43Q68DV7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.56■□□□□ 0.24
RNF43Q68DV7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF43Q68DV7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 AC017083.2-201ENST00000608069 979 ntBASIC16.56■□□□□ 0.24
RNF43Q68DV7 AC008738.7-201ENST00000609744 511 ntBASIC16.56■□□□□ 0.24
RNF43Q68DV7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF43Q68DV7 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF43Q68DV7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF43Q68DV7 REXO1L8P-201ENST00000604378 1897 ntBASIC16.56■□□□□ 0.24
RNF43Q68DV7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF43Q68DV7 AL136982.4-201ENST00000437689 1740 ntBASIC16.56■□□□□ 0.24
RNF43Q68DV7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF43Q68DV7 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF43Q68DV7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 CYP4F24P-201ENST00000586049 1580 ntBASIC16.55■□□□□ 0.24
RNF43Q68DV7 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.55■□□□□ 0.24
RNF43Q68DV7 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 BTBD7P1-201ENST00000447253 1453 ntBASIC16.55■□□□□ 0.24
RNF43Q68DV7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF43Q68DV7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF43Q68DV7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms