Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK4P57078 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC20.55■□□□□ 0.88
RIPK4P57078 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK4P57078 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RIPK4P57078 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC20.55■□□□□ 0.88
RIPK4P57078 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RIPK4P57078 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RIPK4P57078 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RIPK4P57078 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
RIPK4P57078 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.54■□□□□ 0.88
RIPK4P57078 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.54■□□□□ 0.88
RIPK4P57078 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RIPK4P57078 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.54■□□□□ 0.88
RIPK4P57078 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.54■□□□□ 0.88
RIPK4P57078 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RIPK4P57078 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.54■□□□□ 0.88
RIPK4P57078 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.54■□□□□ 0.88
RIPK4P57078 AC005225.4-201ENST00000557330 545 ntBASIC20.54■□□□□ 0.88
RIPK4P57078 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC20.54■□□□□ 0.88
RIPK4P57078 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.54■□□□□ 0.88
RIPK4P57078 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.54■□□□□ 0.88
RIPK4P57078 CECR7-204ENST00000609932 568 ntTSL 2 BASIC20.54■□□□□ 0.88
RIPK4P57078 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.54■□□□□ 0.88
RIPK4P57078 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC20.54■□□□□ 0.88
RIPK4P57078 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
RIPK4P57078 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RIPK4P57078 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RIPK4P57078 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC20.53■□□□□ 0.88
RIPK4P57078 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RIPK4P57078 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.53■□□□□ 0.88
RIPK4P57078 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC20.53■□□□□ 0.88
RIPK4P57078 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RIPK4P57078 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RIPK4P57078 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
RIPK4P57078 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.53■□□□□ 0.88
RIPK4P57078 UBL5-208ENST00000593087 320 ntTSL 3 BASIC20.53■□□□□ 0.88
RIPK4P57078 BRI3BPP1-201ENST00000594224 787 ntBASIC20.53■□□□□ 0.88
RIPK4P57078 WFDC1-204ENST00000613603 549 ntBASIC20.53■□□□□ 0.88
RIPK4P57078 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.53■□□□□ 0.88
RIPK4P57078 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.53■□□□□ 0.88
RIPK4P57078 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 MFF-204ENST00000353339 2186 ntTSL 5 BASIC20.53■□□□□ 0.88
RIPK4P57078 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.53■□□□□ 0.88
RIPK4P57078 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC20.53■□□□□ 0.88
RIPK4P57078 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RIPK4P57078 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RIPK4P57078 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIPK4P57078 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC20.52■□□□□ 0.88
RIPK4P57078 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RIPK4P57078 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIPK4P57078 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RIPK4P57078 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIPK4P57078 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIPK4P57078 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIPK4P57078 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.52■□□□□ 0.88
RIPK4P57078 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RIPK4P57078 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIPK4P57078 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.52■□□□□ 0.88
RIPK4P57078 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.52■□□□□ 0.88
RIPK4P57078 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RIPK4P57078 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC20.52■□□□□ 0.88
RIPK4P57078 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.52■□□□□ 0.88
RIPK4P57078 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.52■□□□□ 0.88
RIPK4P57078 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.52■□□□□ 0.88
RIPK4P57078 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
RIPK4P57078 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RIPK4P57078 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC20.52■□□□□ 0.88
RIPK4P57078 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
RIPK4P57078 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms