Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.69□□□□□ -0.06
PER3P56645 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.69□□□□□ -0.06
PER3P56645 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.69□□□□□ -0.06
PER3P56645 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.69□□□□□ -0.06
PER3P56645 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.69□□□□□ -0.06
PER3P56645 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.69□□□□□ -0.06
PER3P56645 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
PER3P56645 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.69□□□□□ -0.06
PER3P56645 AC009407.1-201ENST00000568958 598 ntBASIC14.69□□□□□ -0.06
PER3P56645 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC14.69□□□□□ -0.06
PER3P56645 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.69□□□□□ -0.06
PER3P56645 RN7SL828P-201ENST00000607615 303 ntBASIC14.69□□□□□ -0.06
PER3P56645 IGHV3-72-202ENST00000621503 303 ntBASIC14.69□□□□□ -0.06
PER3P56645 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.69□□□□□ -0.06
PER3P56645 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PER3P56645 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
PER3P56645 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
PER3P56645 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PER3P56645 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PER3P56645 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PER3P56645 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PER3P56645 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PER3P56645 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PER3P56645 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PER3P56645 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.69□□□□□ -0.06
PER3P56645 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.68□□□□□ -0.06
PER3P56645 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PER3P56645 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PER3P56645 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PER3P56645 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
PER3P56645 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.68□□□□□ -0.06
PER3P56645 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.68□□□□□ -0.06
PER3P56645 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 MIR658-201ENST00000385210 100 ntBASIC14.68□□□□□ -0.06
PER3P56645 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
PER3P56645 DGCR5-201ENST00000399539 862 ntBASIC14.68□□□□□ -0.06
PER3P56645 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.68□□□□□ -0.06
PER3P56645 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.68□□□□□ -0.06
PER3P56645 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.68□□□□□ -0.06
PER3P56645 SERBP1P3-201ENST00000459980 809 ntBASIC14.68□□□□□ -0.06
PER3P56645 RN7SL618P-201ENST00000477850 296 ntBASIC14.68□□□□□ -0.06
PER3P56645 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.68□□□□□ -0.06
PER3P56645 ZNF890P-202ENST00000530367 1156 ntBASIC14.68□□□□□ -0.06
PER3P56645 KRT17P8-201ENST00000540749 863 ntBASIC14.68□□□□□ -0.06
PER3P56645 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.68□□□□□ -0.06
PER3P56645 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.68□□□□□ -0.06
PER3P56645 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.68□□□□□ -0.06
PER3P56645 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.68□□□□□ -0.06
PER3P56645 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.68□□□□□ -0.06
PER3P56645 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.68□□□□□ -0.06
PER3P56645 AL844908.2-201ENST00000609461 460 ntBASIC14.68□□□□□ -0.06
PER3P56645 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.68□□□□□ -0.06
PER3P56645 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
PER3P56645 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PER3P56645 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.68□□□□□ -0.06
PER3P56645 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PER3P56645 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
PER3P56645 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.68□□□□□ -0.06
PER3P56645 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PER3P56645 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PER3P56645 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PER3P56645 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PER3P56645 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.67□□□□□ -0.06
PER3P56645 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PER3P56645 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PER3P56645 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.67□□□□□ -0.06
PER3P56645 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.67□□□□□ -0.06
PER3P56645 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PER3P56645 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PER3P56645 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
PER3P56645 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PER3P56645 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.67□□□□□ -0.06
PER3P56645 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PER3P56645 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PER3P56645 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PER3P56645 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms