Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.92□□□□□ -0.18
CX3CR1P49238 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.92□□□□□ -0.18
CX3CR1P49238 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.92□□□□□ -0.18
CX3CR1P49238 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.92□□□□□ -0.18
CX3CR1P49238 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.92□□□□□ -0.18
CX3CR1P49238 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CX3CR1P49238 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.92□□□□□ -0.18
CX3CR1P49238 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CR1P49238 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
CX3CR1P49238 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CX3CR1P49238 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CR1P49238 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CX3CR1P49238 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.92□□□□□ -0.18
CX3CR1P49238 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CR1P49238 AC105250.1-201ENST00000509378 2057 ntBASIC13.92□□□□□ -0.18
CX3CR1P49238 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CX3CR1P49238 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CR1P49238 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.92□□□□□ -0.18
CX3CR1P49238 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CX3CR1P49238 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.91□□□□□ -0.18
CX3CR1P49238 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 AP002414.2-201ENST00000591780 3365 ntBASIC13.91□□□□□ -0.18
CX3CR1P49238 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.91□□□□□ -0.18
CX3CR1P49238 KRT8P37-201ENST00000451609 1420 ntBASIC13.91□□□□□ -0.18
CX3CR1P49238 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CX3CR1P49238 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.91□□□□□ -0.18
CX3CR1P49238 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 AC023157.3-201ENST00000619086 2088 ntBASIC13.91□□□□□ -0.18
CX3CR1P49238 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.91□□□□□ -0.18
CX3CR1P49238 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.91□□□□□ -0.18
CX3CR1P49238 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.91□□□□□ -0.18
CX3CR1P49238 AC005237.2-201ENST00000434368 219 ntBASIC13.91□□□□□ -0.18
CX3CR1P49238 DNAJB3-201ENST00000446806 729 ntBASIC13.91□□□□□ -0.18
CX3CR1P49238 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.91□□□□□ -0.18
CX3CR1P49238 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.91□□□□□ -0.18
CX3CR1P49238 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.91□□□□□ -0.18
CX3CR1P49238 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 RARRES2P9-201ENST00000565168 469 ntBASIC13.91□□□□□ -0.18
CX3CR1P49238 AC005829.1-201ENST00000570002 483 ntBASIC13.91□□□□□ -0.18
CX3CR1P49238 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.91□□□□□ -0.18
CX3CR1P49238 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.91□□□□□ -0.18
CX3CR1P49238 AL671883.3-201ENST00000603274 991 ntBASIC13.91□□□□□ -0.18
CX3CR1P49238 AL450472.2-201ENST00000603663 1156 ntBASIC13.91□□□□□ -0.18
CX3CR1P49238 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CX3CR1P49238 AC055717.3-201ENST00000622967 595 ntBASIC13.91□□□□□ -0.18
CX3CR1P49238 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 AC090616.6-203ENST00000579186 1945 ntBASIC13.91□□□□□ -0.18
CX3CR1P49238 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.91□□□□□ -0.18
CX3CR1P49238 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.91□□□□□ -0.18
CX3CR1P49238 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CX3CR1P49238 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CR1P49238 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CX3CR1P49238 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CR1P49238 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CR1P49238 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CX3CR1P49238 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.9□□□□□ -0.18
CX3CR1P49238 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms