Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.07□□□□□ -0.16
CTSSP25774 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTSSP25774 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 AC098850.1-201ENST00000419919 790 ntBASIC14.07□□□□□ -0.16
CTSSP25774 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 RN7SL837P-201ENST00000463010 287 ntBASIC14.07□□□□□ -0.16
CTSSP25774 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.07□□□□□ -0.16
CTSSP25774 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 AC036164.1-201ENST00000570544 333 ntBASIC14.07□□□□□ -0.16
CTSSP25774 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.07□□□□□ -0.16
CTSSP25774 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.07□□□□□ -0.16
CTSSP25774 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.07□□□□□ -0.16
CTSSP25774 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.07□□□□□ -0.16
CTSSP25774 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CTSSP25774 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTSSP25774 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.07□□□□□ -0.16
CTSSP25774 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CTSSP25774 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
CTSSP25774 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.07□□□□□ -0.16
CTSSP25774 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CTSSP25774 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSSP25774 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.06□□□□□ -0.16
CTSSP25774 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CTSSP25774 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CTSSP25774 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
CTSSP25774 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSSP25774 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CTSSP25774 ARSEP1-201ENST00000420443 635 ntBASIC14.06□□□□□ -0.16
CTSSP25774 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.06□□□□□ -0.16
CTSSP25774 RPL13P2-201ENST00000440687 659 ntBASIC14.06□□□□□ -0.16
CTSSP25774 TARDBPP1-201ENST00000442013 1203 ntBASIC14.06□□□□□ -0.16
CTSSP25774 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CTSSP25774 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSSP25774 PHKG1P2-201ENST00000457537 863 ntBASIC14.06□□□□□ -0.16
CTSSP25774 RN7SL399P-201ENST00000471648 279 ntBASIC14.06□□□□□ -0.16
CTSSP25774 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.06□□□□□ -0.16
CTSSP25774 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.06□□□□□ -0.16
CTSSP25774 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.06□□□□□ -0.16
CTSSP25774 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSSP25774 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSSP25774 MIR8072-201ENST00000614241 80 ntBASIC14.06□□□□□ -0.16
CTSSP25774 AL162274.1-201ENST00000617191 1098 ntBASIC14.06□□□□□ -0.16
CTSSP25774 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.06□□□□□ -0.16
CTSSP25774 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.06□□□□□ -0.16
CTSSP25774 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.06□□□□□ -0.16
CTSSP25774 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CTSSP25774 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CTSSP25774 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms