Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SSSCA1O60232 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.93□□□□□ -0.34
SSSCA1O60232 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SSSCA1O60232 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.93□□□□□ -0.34
SSSCA1O60232 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
SSSCA1O60232 PMS2P4-201ENST00000412466 1052 ntBASIC12.93□□□□□ -0.34
SSSCA1O60232 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SSSCA1O60232 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.93□□□□□ -0.34
SSSCA1O60232 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 FGFR3P6-201ENST00000457012 610 ntBASIC12.93□□□□□ -0.34
SSSCA1O60232 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.93□□□□□ -0.34
SSSCA1O60232 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.93□□□□□ -0.34
SSSCA1O60232 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 MIR3909-201ENST00000579518 119 ntBASIC12.93□□□□□ -0.34
SSSCA1O60232 AC008608.2-201ENST00000606089 416 ntBASIC12.93□□□□□ -0.34
SSSCA1O60232 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.93□□□□□ -0.34
SSSCA1O60232 NPAP1P7-201ENST00000613027 823 ntBASIC12.93□□□□□ -0.34
SSSCA1O60232 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.93□□□□□ -0.34
SSSCA1O60232 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SSSCA1O60232 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SSSCA1O60232 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.93□□□□□ -0.34
SSSCA1O60232 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.93□□□□□ -0.34
SSSCA1O60232 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SSSCA1O60232 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SSSCA1O60232 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.93□□□□□ -0.34
SSSCA1O60232 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
SSSCA1O60232 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SSSCA1O60232 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
SSSCA1O60232 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
SSSCA1O60232 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SSSCA1O60232 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 AC127383.1-201ENST00000444697 1800 ntBASIC12.92□□□□□ -0.34
SSSCA1O60232 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SSSCA1O60232 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC12.92□□□□□ -0.34
SSSCA1O60232 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 DUSP5P1-201ENST00000441325 1139 ntBASIC12.92□□□□□ -0.34
SSSCA1O60232 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 FOSL1P1-201ENST00000511041 816 ntBASIC12.92□□□□□ -0.34
SSSCA1O60232 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSSCA1O60232 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC12.92□□□□□ -0.34
SSSCA1O60232 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms