Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.05□□□□□ -0.16
SGCEO43556 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.05□□□□□ -0.16
SGCEO43556 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.05□□□□□ -0.16
SGCEO43556 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SGCEO43556 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.05□□□□□ -0.16
SGCEO43556 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.05□□□□□ -0.16
SGCEO43556 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SGCEO43556 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.05□□□□□ -0.16
SGCEO43556 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.05□□□□□ -0.16
SGCEO43556 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.05□□□□□ -0.16
SGCEO43556 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SGCEO43556 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.04□□□□□ -0.16
SGCEO43556 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SGCEO43556 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SGCEO43556 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SGCEO43556 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SGCEO43556 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 AC004987.2-201ENST00000395959 1148 ntBASIC14.04□□□□□ -0.16
SGCEO43556 AC254562.1-201ENST00000417586 456 ntBASIC14.04□□□□□ -0.16
SGCEO43556 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.04□□□□□ -0.16
SGCEO43556 RBPMS2P1-201ENST00000437762 623 ntBASIC14.04□□□□□ -0.16
SGCEO43556 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.04□□□□□ -0.16
SGCEO43556 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.04□□□□□ -0.16
SGCEO43556 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.04□□□□□ -0.16
SGCEO43556 AC023141.5-201ENST00000458585 616 ntBASIC14.04□□□□□ -0.16
SGCEO43556 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.04□□□□□ -0.16
SGCEO43556 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SGCEO43556 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.04□□□□□ -0.16
SGCEO43556 AC093520.2-201ENST00000561830 333 ntBASIC14.04□□□□□ -0.16
SGCEO43556 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.04□□□□□ -0.16
SGCEO43556 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.04□□□□□ -0.16
SGCEO43556 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.04□□□□□ -0.16
SGCEO43556 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 AP002414.2-201ENST00000591780 3365 ntBASIC14.04□□□□□ -0.16
SGCEO43556 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SGCEO43556 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.03□□□□□ -0.16
SGCEO43556 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SGCEO43556 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.03□□□□□ -0.16
SGCEO43556 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SGCEO43556 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.03□□□□□ -0.16
SGCEO43556 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.03□□□□□ -0.16
SGCEO43556 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.03□□□□□ -0.16
SGCEO43556 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.03□□□□□ -0.16
SGCEO43556 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SGCEO43556 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SGCEO43556 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SGCEO43556 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.03□□□□□ -0.16
SGCEO43556 AC009093.7-201ENST00000623853 1223 ntBASIC14.03□□□□□ -0.16
SGCEO43556 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.03□□□□□ -0.16
SGCEO43556 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 BNIP3P1-202ENST00000550043 1585 ntBASIC14.03□□□□□ -0.16
SGCEO43556 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SGCEO43556 AL136982.4-201ENST00000437689 1740 ntBASIC14.03□□□□□ -0.16
SGCEO43556 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.03□□□□□ -0.16
SGCEO43556 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SGCEO43556 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SGCEO43556 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SGCEO43556 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms