Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC074044.1-201ENST00000609673 707 ntBASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPA2E9PIF3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 PCDHA1-201ENST00000378133 2726 ntBASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 AP001282.1-201ENST00000531301 1499 ntBASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 OR8S1-201ENST00000310194 1080 ntBASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 INE1-201ENST00000456273 945 ntBASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 AC025048.3-201ENST00000590609 569 ntBASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 AC005702.4-201ENST00000618393 416 ntBASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 AL691432.1-201ENST00000596308 1422 ntBASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NPIPA2E9PIF3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
NPIPA2E9PIF3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 MYCLP2-201ENST00000449268 967 ntBASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 AC011495.1-201ENST00000498085 584 ntBASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA2E9PIF3 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms