Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 GNRHR2-203ENST00000581100 1187 ntBASIC16.36■□□□□ 0.21
YIPF1Q9Y548 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 AC020916.1-201ENST00000587762 1774 ntBASIC16.36■□□□□ 0.21
YIPF1Q9Y548 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
YIPF1Q9Y548 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 CSF2RBP1-201ENST00000447905 391 ntBASIC16.35■□□□□ 0.21
YIPF1Q9Y548 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
YIPF1Q9Y548 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 AL138799.1-201ENST00000448213 1675 ntBASIC16.34■□□□□ 0.21
YIPF1Q9Y548 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.34■□□□□ 0.21
YIPF1Q9Y548 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 AL583810.1-201ENST00000553344 1045 ntBASIC16.34■□□□□ 0.21
YIPF1Q9Y548 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
YIPF1Q9Y548 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
YIPF1Q9Y548 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
YIPF1Q9Y548 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
YIPF1Q9Y548 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.33■□□□□ 0.21
YIPF1Q9Y548 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
YIPF1Q9Y548 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
YIPF1Q9Y548 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.33■□□□□ 0.21
YIPF1Q9Y548 AC112504.1-201ENST00000623415 1841 ntBASIC16.33■□□□□ 0.21
YIPF1Q9Y548 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
YIPF1Q9Y548 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.33■□□□□ 0.21
YIPF1Q9Y548 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.33■□□□□ 0.21
YIPF1Q9Y548 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
YIPF1Q9Y548 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.33■□□□□ 0.2
YIPF1Q9Y548 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms