Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL513477.1-201ENST00000602865 2407 ntBASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 HTR5BP-201ENST00000430851 1154 ntBASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 MKNK2P1-201ENST00000437526 628 ntBASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 POLD2P1-201ENST00000511220 997 ntBASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 PGAM5P1-201ENST00000518923 814 ntBASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 RARRES2P9-201ENST00000565168 469 ntBASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LRTM1Q9HBL6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 AL645939.2-201ENST00000427340 991 ntBASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 MTDHP5-201ENST00000598980 586 ntBASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
LRTM1Q9HBL6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRTM1Q9HBL6 KRT8P44-201ENST00000441609 1350 ntBASIC15.21■□□□□ 0.02
LRTM1Q9HBL6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
LRTM1Q9HBL6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LRTM1Q9HBL6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LRTM1Q9HBL6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.21■□□□□ 0.02
LRTM1Q9HBL6 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 AL161772.1-201ENST00000610494 4412 ntBASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 TCAF2P1-201ENST00000291129 2421 ntBASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 KRT18P13-201ENST00000400056 1290 ntBASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 ALG1L5P-201ENST00000482043 771 ntBASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 HNRNPUP1-201ENST00000554987 333 ntBASIC15.2■□□□□ 0.02
LRTM1Q9HBL6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms