Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TRGV9Q99603 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.34□□□□□ -0.43
TRGV9Q99603 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 AL591424.1-201ENST00000442569 1213 ntBASIC12.34□□□□□ -0.43
TRGV9Q99603 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.34□□□□□ -0.43
TRGV9Q99603 KRT126P-201ENST00000549467 1181 ntBASIC12.34□□□□□ -0.43
TRGV9Q99603 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.34□□□□□ -0.43
TRGV9Q99603 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TRGV9Q99603 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC12.34□□□□□ -0.43
TRGV9Q99603 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.34□□□□□ -0.43
TRGV9Q99603 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 AC091951.1-201ENST00000512854 2465 ntBASIC12.34□□□□□ -0.43
TRGV9Q99603 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC12.34□□□□□ -0.43
TRGV9Q99603 AC007292.2-201ENST00000593524 1812 ntBASIC12.34□□□□□ -0.43
TRGV9Q99603 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 MROH4P-201ENST00000431302 1578 ntBASIC12.34□□□□□ -0.43
TRGV9Q99603 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.34□□□□□ -0.43
TRGV9Q99603 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.34□□□□□ -0.43
TRGV9Q99603 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRGV9Q99603 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TRGV9Q99603 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.34□□□□□ -0.43
TRGV9Q99603 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRGV9Q99603 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRGV9Q99603 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRGV9Q99603 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
TRGV9Q99603 CELP-203ENST00000624767 2414 ntTSL 5 BASIC12.33□□□□□ -0.43
TRGV9Q99603 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRGV9Q99603 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRGV9Q99603 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 ZNF259P1-201ENST00000407656 1365 ntBASIC12.33□□□□□ -0.44
TRGV9Q99603 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.33□□□□□ -0.44
TRGV9Q99603 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRGV9Q99603 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.33□□□□□ -0.44
TRGV9Q99603 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRGV9Q99603 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRGV9Q99603 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 TPM4P1-201ENST00000436100 807 ntBASIC12.33□□□□□ -0.44
TRGV9Q99603 ELP6-209ENST00000446787 894 ntTSL 3 BASIC12.33□□□□□ -0.44
TRGV9Q99603 AC009078.2-202ENST00000463353 338 ntBASIC12.33□□□□□ -0.44
TRGV9Q99603 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
TRGV9Q99603 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.33□□□□□ -0.44
TRGV9Q99603 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.33□□□□□ -0.44
TRGV9Q99603 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.33□□□□□ -0.44
TRGV9Q99603 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.33□□□□□ -0.44
TRGV9Q99603 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
TRGV9Q99603 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TRGV9Q99603 AC013726.1-201ENST00000563747 2285 ntBASIC12.33□□□□□ -0.44
TRGV9Q99603 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRGV9Q99603 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC12.33□□□□□ -0.44
TRGV9Q99603 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.33□□□□□ -0.44
TRGV9Q99603 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.33□□□□□ -0.44
TRGV9Q99603 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 CICP24-201ENST00000605464 2705 ntBASIC12.33□□□□□ -0.44
TRGV9Q99603 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRGV9Q99603 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.33□□□□□ -0.44
TRGV9Q99603 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRGV9Q99603 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms