Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 FAM21FP-201ENST00000426241 1131 ntBASIC18.45■□□□□ 0.54
TRIM47Q96LD4 AL162726.2-201ENST00000438986 1017 ntBASIC18.45■□□□□ 0.54
TRIM47Q96LD4 BCRP2-202ENST00000447763 634 ntBASIC18.45■□□□□ 0.54
TRIM47Q96LD4 FO681548.1-201ENST00000455617 1132 ntBASIC18.45■□□□□ 0.54
TRIM47Q96LD4 BCRP6-201ENST00000510112 632 ntBASIC18.45■□□□□ 0.54
TRIM47Q96LD4 BCRP7-201ENST00000511549 544 ntBASIC18.45■□□□□ 0.54
TRIM47Q96LD4 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 TDH-203ENST00000531764 1110 ntBASIC18.45■□□□□ 0.54
TRIM47Q96LD4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 AL139099.5-201ENST00000635274 300 ntBASIC18.45■□□□□ 0.54
TRIM47Q96LD4 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 AC008894.3-201ENST00000624324 3103 ntBASIC18.45■□□□□ 0.54
TRIM47Q96LD4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRIM47Q96LD4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 AC005229.1-201ENST00000392885 409 ntBASIC18.44■□□□□ 0.54
TRIM47Q96LD4 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 AC092506.1-202ENST00000401022 528 ntBASIC18.44■□□□□ 0.54
TRIM47Q96LD4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 GOLGA2P4-201ENST00000441462 777 ntBASIC18.44■□□□□ 0.54
TRIM47Q96LD4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 AC020765.3-201ENST00000613051 740 ntBASIC18.44■□□□□ 0.54
TRIM47Q96LD4 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
TRIM47Q96LD4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRIM47Q96LD4 FO393414.2-201ENST00000405153 598 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms