Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
DDR1Q08345 AC006449.6-201ENST00000612330 2296 ntBASIC19.31■□□□□ 0.68
DDR1Q08345 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DDR1Q08345 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
DDR1Q08345 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
DDR1Q08345 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.31■□□□□ 0.68
DDR1Q08345 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.31■□□□□ 0.68
DDR1Q08345 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
DDR1Q08345 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
DDR1Q08345 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
DDR1Q08345 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.3■□□□□ 0.68
DDR1Q08345 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.3■□□□□ 0.68
DDR1Q08345 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.3■□□□□ 0.68
DDR1Q08345 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC19.3■□□□□ 0.68
DDR1Q08345 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.3■□□□□ 0.68
DDR1Q08345 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.3■□□□□ 0.68
DDR1Q08345 EIF3FP3-201ENST00000434851 1086 ntBASIC19.3■□□□□ 0.68
DDR1Q08345 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.3■□□□□ 0.68
DDR1Q08345 OR10B1P-201ENST00000601666 907 ntBASIC19.3■□□□□ 0.68
DDR1Q08345 MIR7845-201ENST00000618396 99 ntBASIC19.3■□□□□ 0.68
DDR1Q08345 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.3■□□□□ 0.68
DDR1Q08345 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
DDR1Q08345 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.3■□□□□ 0.68
DDR1Q08345 LRRC59-203ENST00000576448 1531 ntBASIC19.3■□□□□ 0.68
DDR1Q08345 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.3■□□□□ 0.68
DDR1Q08345 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
DDR1Q08345 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
DDR1Q08345 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
DDR1Q08345 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.29■□□□□ 0.68
DDR1Q08345 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC19.29■□□□□ 0.68
DDR1Q08345 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.29■□□□□ 0.68
DDR1Q08345 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
DDR1Q08345 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.29■□□□□ 0.68
DDR1Q08345 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC19.29■□□□□ 0.68
DDR1Q08345 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
DDR1Q08345 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
DDR1Q08345 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.29■□□□□ 0.68
DDR1Q08345 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.29■□□□□ 0.68
DDR1Q08345 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC19.29■□□□□ 0.68
DDR1Q08345 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
DDR1Q08345 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC19.29■□□□□ 0.68
DDR1Q08345 RPL17P11-201ENST00000417593 544 ntBASIC19.29■□□□□ 0.68
DDR1Q08345 POM121L8P-201ENST00000417732 1281 ntBASIC19.29■□□□□ 0.68
DDR1Q08345 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 POM121L9P-203ENST00000441984 1285 ntBASIC19.29■□□□□ 0.68
DDR1Q08345 FTLP1-201ENST00000449155 526 ntBASIC19.29■□□□□ 0.68
DDR1Q08345 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.29■□□□□ 0.68
DDR1Q08345 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC19.29■□□□□ 0.68
DDR1Q08345 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 NUP210P1-202ENST00000504322 710 ntBASIC19.29■□□□□ 0.68
DDR1Q08345 AL391280.1-201ENST00000506969 1062 ntBASIC19.29■□□□□ 0.68
DDR1Q08345 AC024681.1-201ENST00000521917 487 ntBASIC19.29■□□□□ 0.68
DDR1Q08345 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
DDR1Q08345 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
DDR1Q08345 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.29■□□□□ 0.68
DDR1Q08345 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC19.29■□□□□ 0.68
DDR1Q08345 AC022188.1-201ENST00000620960 1664 ntBASIC19.29■□□□□ 0.68
DDR1Q08345 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC19.29■□□□□ 0.68
DDR1Q08345 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
DDR1Q08345 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.29■□□□□ 0.68
DDR1Q08345 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
DDR1Q08345 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
DDR1Q08345 AC011270.2-201ENST00000624293 2550 ntBASIC19.29■□□□□ 0.68
DDR1Q08345 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
DDR1Q08345 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms