Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.89■□□□□ 0.3
SSR1P43307 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SSR1P43307 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SSR1P43307 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SSR1P43307 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.89■□□□□ 0.29
SSR1P43307 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.89■□□□□ 0.29
SSR1P43307 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.89■□□□□ 0.29
SSR1P43307 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 AP001282.1-201ENST00000531301 1499 ntBASIC16.89■□□□□ 0.29
SSR1P43307 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SSR1P43307 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SSR1P43307 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 MIR574-201ENST00000385209 96 ntBASIC16.89■□□□□ 0.29
SSR1P43307 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 YBX2P1-201ENST00000394192 760 ntBASIC16.89■□□□□ 0.29
SSR1P43307 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.89■□□□□ 0.29
SSR1P43307 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.89■□□□□ 0.29
SSR1P43307 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.89■□□□□ 0.29
SSR1P43307 GPX1P2-201ENST00000429271 606 ntBASIC16.89■□□□□ 0.29
SSR1P43307 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.89■□□□□ 0.29
SSR1P43307 RN7SL589P-201ENST00000481268 310 ntBASIC16.89■□□□□ 0.29
SSR1P43307 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.89■□□□□ 0.29
SSR1P43307 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SSR1P43307 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.89■□□□□ 0.29
SSR1P43307 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.89■□□□□ 0.29
SSR1P43307 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.89■□□□□ 0.29
SSR1P43307 AC073389.1-201ENST00000595595 795 ntBASIC16.89■□□□□ 0.29
SSR1P43307 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SSR1P43307 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.89■□□□□ 0.29
SSR1P43307 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.89■□□□□ 0.29
SSR1P43307 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SSR1P43307 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.89■□□□□ 0.29
SSR1P43307 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SSR1P43307 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.88■□□□□ 0.29
SSR1P43307 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.88■□□□□ 0.29
SSR1P43307 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
SSR1P43307 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SSR1P43307 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.88■□□□□ 0.29
SSR1P43307 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SSR1P43307 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.88■□□□□ 0.29
SSR1P43307 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.88■□□□□ 0.29
SSR1P43307 UXT-AS1-201ENST00000590504 1525 ntBASIC16.88■□□□□ 0.29
SSR1P43307 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.88■□□□□ 0.29
SSR1P43307 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SSR1P43307 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.88■□□□□ 0.29
SSR1P43307 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SSR1P43307 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SSR1P43307 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
SSR1P43307 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.88■□□□□ 0.29
SSR1P43307 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.88■□□□□ 0.29
SSR1P43307 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.88■□□□□ 0.29
SSR1P43307 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.88■□□□□ 0.29
SSR1P43307 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.88■□□□□ 0.29
SSR1P43307 AC026120.1-201ENST00000611536 926 ntBASIC16.88■□□□□ 0.29
SSR1P43307 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
SSR1P43307 AC092384.3-202ENST00000564646 2873 ntBASIC16.88■□□□□ 0.29
SSR1P43307 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.88■□□□□ 0.29
SSR1P43307 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.88■□□□□ 0.29
SSR1P43307 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.88■□□□□ 0.29
SSR1P43307 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.88■□□□□ 0.29
SSR1P43307 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.88■□□□□ 0.29
SSR1P43307 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SSR1P43307 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SSR1P43307 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SSR1P43307 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SSR1P43307 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.87■□□□□ 0.29
SSR1P43307 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.87■□□□□ 0.29
SSR1P43307 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms