Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RB1P06400 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
RB1P06400 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.55■□□□□ 0.24
RB1P06400 RN7SL769P-201ENST00000469386 295 ntBASIC16.55■□□□□ 0.24
RB1P06400 HIST2H2BC-201ENST00000498492 580 ntBASIC16.55■□□□□ 0.24
RB1P06400 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.55■□□□□ 0.24
RB1P06400 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.55■□□□□ 0.24
RB1P06400 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.55■□□□□ 0.24
RB1P06400 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.55■□□□□ 0.24
RB1P06400 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
RB1P06400 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.55■□□□□ 0.24
RB1P06400 AC105129.2-201ENST00000559536 390 ntBASIC16.55■□□□□ 0.24
RB1P06400 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.55■□□□□ 0.24
RB1P06400 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.55■□□□□ 0.24
RB1P06400 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 AL354989.2-201ENST00000435838 1540 ntBASIC16.55■□□□□ 0.24
RB1P06400 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 NFIC-211ENST00000641145 8399 ntBASIC16.55■□□□□ 0.24
RB1P06400 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RB1P06400 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.54■□□□□ 0.24
RB1P06400 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RB1P06400 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.54■□□□□ 0.24
RB1P06400 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.54■□□□□ 0.24
RB1P06400 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RB1P06400 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.54■□□□□ 0.24
RB1P06400 KLF2P2-201ENST00000416807 1039 ntBASIC16.54■□□□□ 0.24
RB1P06400 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.54■□□□□ 0.24
RB1P06400 HSPB1P2-201ENST00000448722 546 ntBASIC16.54■□□□□ 0.24
RB1P06400 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC16.54■□□□□ 0.24
RB1P06400 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC16.54■□□□□ 0.24
RB1P06400 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.54■□□□□ 0.24
RB1P06400 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.54■□□□□ 0.24
RB1P06400 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.54■□□□□ 0.24
RB1P06400 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.54■□□□□ 0.24
RB1P06400 NKG7-204ENST00000595217 816 ntTSL 2 BASIC16.54■□□□□ 0.24
RB1P06400 NDUFV2P1-201ENST00000596415 907 ntBASIC16.54■□□□□ 0.24
RB1P06400 AC138627.1-207ENST00000641560 1006 ntBASIC16.54■□□□□ 0.24
RB1P06400 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RB1P06400 ME2P1-201ENST00000426028 1970 ntBASIC16.54■□□□□ 0.24
RB1P06400 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RB1P06400 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RB1P06400 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
RB1P06400 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
RB1P06400 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.54■□□□□ 0.24
RB1P06400 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.54■□□□□ 0.24
RB1P06400 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.54■□□□□ 0.24
RB1P06400 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RB1P06400 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.53■□□□□ 0.24
RB1P06400 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RB1P06400 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RB1P06400 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RB1P06400 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RB1P06400 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RB1P06400 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.53■□□□□ 0.24
RB1P06400 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.53■□□□□ 0.24
RB1P06400 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.53■□□□□ 0.24
RB1P06400 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.53■□□□□ 0.24
RB1P06400 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RB1P06400 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RB1P06400 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RB1P06400 AC079178.1-201ENST00000420915 656 ntBASIC16.53■□□□□ 0.24
RB1P06400 EIF4HP1-201ENST00000453115 687 ntBASIC16.53■□□□□ 0.24
RB1P06400 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.53■□□□□ 0.24
RB1P06400 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.53■□□□□ 0.24
RB1P06400 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RB1P06400 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RB1P06400 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RB1P06400 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RB1P06400 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RB1P06400 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RB1P06400 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RB1P06400 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RB1P06400 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RB1P06400 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms