Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 CD8B2-202ENST00000417670 633 ntBASIC14.25□□□□□ -0.13
SPTA1P02549 AC134698.3-201ENST00000523880 214 ntBASIC14.25□□□□□ -0.13
SPTA1P02549 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.25□□□□□ -0.13
SPTA1P02549 RN7SL555P-201ENST00000584742 339 ntBASIC14.25□□□□□ -0.13
SPTA1P02549 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SPTA1P02549 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.25□□□□□ -0.13
SPTA1P02549 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SPTA1P02549 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SPTA1P02549 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SPTA1P02549 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
SPTA1P02549 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.25□□□□□ -0.13
SPTA1P02549 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 AC000095.1-201ENST00000603208 874 ntBASIC14.25□□□□□ -0.13
SPTA1P02549 CU633904.3-201ENST00000624042 1029 ntBASIC14.25□□□□□ -0.13
SPTA1P02549 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.25□□□□□ -0.13
SPTA1P02549 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SPTA1P02549 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.25□□□□□ -0.13
SPTA1P02549 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SPTA1P02549 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC14.25□□□□□ -0.13
SPTA1P02549 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SPTA1P02549 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.24□□□□□ -0.13
SPTA1P02549 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.24□□□□□ -0.13
SPTA1P02549 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
SPTA1P02549 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.24□□□□□ -0.13
SPTA1P02549 FAM197Y7-201ENST00000432892 766 ntBASIC14.24□□□□□ -0.13
SPTA1P02549 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.24□□□□□ -0.13
SPTA1P02549 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC14.24□□□□□ -0.13
SPTA1P02549 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.24□□□□□ -0.13
SPTA1P02549 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.24□□□□□ -0.13
SPTA1P02549 AC079336.7-201ENST00000623428 1078 ntBASIC14.24□□□□□ -0.13
SPTA1P02549 AC006453.4-201ENST00000636949 1252 ntBASIC14.24□□□□□ -0.13
SPTA1P02549 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.24□□□□□ -0.13
SPTA1P02549 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SPTA1P02549 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.24□□□□□ -0.13
SPTA1P02549 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC14.24□□□□□ -0.13
SPTA1P02549 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
SPTA1P02549 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.24□□□□□ -0.13
SPTA1P02549 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.24□□□□□ -0.13
SPTA1P02549 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
SPTA1P02549 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SPTA1P02549 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.24□□□□□ -0.13
SPTA1P02549 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.24□□□□□ -0.13
SPTA1P02549 AC044849.1-201ENST00000519737 1188 ntBASIC14.24□□□□□ -0.13
SPTA1P02549 AL645939.5-201ENST00000606834 243 ntBASIC14.24□□□□□ -0.13
SPTA1P02549 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC14.24□□□□□ -0.13
SPTA1P02549 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.24□□□□□ -0.13
SPTA1P02549 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.24□□□□□ -0.13
SPTA1P02549 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.24□□□□□ -0.13
SPTA1P02549 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.24□□□□□ -0.13
SPTA1P02549 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.24□□□□□ -0.13
SPTA1P02549 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.24□□□□□ -0.13
SPTA1P02549 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SPTA1P02549 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SPTA1P02549 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTA1P02549 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTA1P02549 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTA1P02549 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTA1P02549 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTA1P02549 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTA1P02549 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTA1P02549 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.23□□□□□ -0.13
SPTA1P02549 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SPTA1P02549 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
SPTA1P02549 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SPTA1P02549 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms