Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SEMA3EO15041 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 PCDH8P1-201ENST00000428983 2773 ntBASIC18.86■□□□□ 0.61
SEMA3EO15041 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
SEMA3EO15041 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC18.86■□□□□ 0.61
SEMA3EO15041 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.86■□□□□ 0.61
SEMA3EO15041 PGGT1BP2-201ENST00000398621 1028 ntBASIC18.86■□□□□ 0.61
SEMA3EO15041 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SEMA3EO15041 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SEMA3EO15041 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SEMA3EO15041 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.86■□□□□ 0.61
SEMA3EO15041 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC18.86■□□□□ 0.61
SEMA3EO15041 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.86■□□□□ 0.61
SEMA3EO15041 MIR4259-201ENST00000584466 101 ntBASIC18.86■□□□□ 0.61
SEMA3EO15041 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.86■□□□□ 0.61
SEMA3EO15041 AC025181.2-201ENST00000606994 802 ntBASIC18.86■□□□□ 0.61
SEMA3EO15041 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.86■□□□□ 0.61
SEMA3EO15041 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SEMA3EO15041 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.86■□□□□ 0.61
SEMA3EO15041 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC18.86■□□□□ 0.61
SEMA3EO15041 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SEMA3EO15041 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.86■□□□□ 0.61
SEMA3EO15041 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SEMA3EO15041 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3EO15041 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
SEMA3EO15041 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.85■□□□□ 0.61
SEMA3EO15041 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SEMA3EO15041 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.85■□□□□ 0.61
SEMA3EO15041 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.85■□□□□ 0.61
SEMA3EO15041 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SEMA3EO15041 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SEMA3EO15041 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.85■□□□□ 0.61
SEMA3EO15041 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.85■□□□□ 0.61
SEMA3EO15041 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.85■□□□□ 0.61
SEMA3EO15041 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 AC090142.2-201ENST00000483263 416 ntBASIC18.85■□□□□ 0.61
SEMA3EO15041 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.85■□□□□ 0.61
SEMA3EO15041 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.85■□□□□ 0.61
SEMA3EO15041 AP000812.2-201ENST00000538934 718 ntBASIC18.85■□□□□ 0.61
SEMA3EO15041 KSR1-207ENST00000578981 748 ntTSL 4 BASIC18.85■□□□□ 0.61
SEMA3EO15041 AP005019.2-201ENST00000615104 511 ntBASIC18.85■□□□□ 0.61
SEMA3EO15041 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.85■□□□□ 0.61
SEMA3EO15041 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.85■□□□□ 0.61
SEMA3EO15041 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
SEMA3EO15041 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.85■□□□□ 0.61
SEMA3EO15041 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.85■□□□□ 0.61
SEMA3EO15041 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SEMA3EO15041 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.84■□□□□ 0.61
SEMA3EO15041 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SEMA3EO15041 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 MSTO2P-201ENST00000314835 1709 ntBASIC18.84■□□□□ 0.61
SEMA3EO15041 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SEMA3EO15041 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.84■□□□□ 0.61
SEMA3EO15041 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SEMA3EO15041 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.84■□□□□ 0.61
SEMA3EO15041 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.84■□□□□ 0.61
SEMA3EO15041 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.84■□□□□ 0.61
SEMA3EO15041 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
SEMA3EO15041 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.84■□□□□ 0.61
SEMA3EO15041 KLF2P4-201ENST00000451959 1225 ntBASIC18.84■□□□□ 0.61
SEMA3EO15041 AP001582.1-201ENST00000525856 295 ntBASIC18.84■□□□□ 0.61
SEMA3EO15041 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.84■□□□□ 0.61
SEMA3EO15041 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEMA3EO15041 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms