Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 AC026954.1-201ENST00000429771 1293 ntBASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SLC46A2Q9BY10 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 FAM21FP-201ENST00000426241 1131 ntBASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 KRT90P-201ENST00000549264 1064 ntBASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 AP005019.2-201ENST00000615104 511 ntBASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 TUBB1P2-201ENST00000422712 1306 ntBASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 TUBB1P1-201ENST00000503144 1300 ntBASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 AC112504.1-201ENST00000623415 1841 ntBASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC46A2Q9BY10 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC46A2Q9BY10 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 RHOXF1P1-202ENST00000635473 501 ntBASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC46A2Q9BY10 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC46A2Q9BY10 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms